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sw_8_scaffold_610_5

Organism: SW_8_Viridiplantae_55_9

partial RP 28 / 55 MC: 12 BSCG 18 / 51 MC: 4 ASCG 13 / 38 MC: 2
Location: 5179..6138

Top 3 Functional Annotations

Value Algorithm Source
DNA ligase {ECO:0000256|RuleBase:RU000617}; EC=6.5.1.1 {ECO:0000256|RuleBase:RU000617};; Flags: Fragment;; TaxID=9305 species="Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammali similarity UNIPROT
DB: UniProtKB
  • Identity: 37.4
  • Coverage: 305.0
  • Bit_score: 200
  • Evalue 4.90e-48
PREDICTED: DNA ligase 1 n=1 Tax=Echinops telfairi RepID=UPI0003340360 similarity UNIREF
DB: UNIREF100
  • Identity: 38.6
  • Coverage: 306.0
  • Bit_score: 201
  • Evalue 1.60e-48
ATP-dependent DNA ligase similarity KEGG
DB: KEGG
  • Identity: 33.1
  • Coverage: 251.0
  • Bit_score: 148
  • Evalue 4.40e-33

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Taxonomy

Sarcophilus harrisii → Sarcophilus → Dasyuromorphia → Mammalia → Chordata → Metazoa

Sequences

DNA sequence
Length: 960
ATGCGACTTGGAGCTAATCGAATCAGCGTCCTGCAAGCTTTTGGCTACGCTACCTATCTACATCATCGCTTCGGGCCTCGTAAAATATCTACTGCGGAGGAGAGCCCTATATCGAAAGAGGATTGGAACTGGGCTGGAAGCTCTGTCAAGCGATGCTTCAGCCTGCGTCCCGACTTGACAACTCTTCTCAAATGTCTAATACAAGGCGGCATAGAGAAGATGCTGCAAGAGTGCACATTGCGTCCTGGACTTCCTGTCCAGCCTATGCTTGGCCAGATCTCGCGTGGCATTGGTCATGCGGTGAAGCAATTCAACGGTGCTTTGCTTGCAGAATTCAAGTATGACGGCATGAGAGCGCAGATTCATATGACGCAAGATGAGATGAAAGTTTTCTCCAGGAAGAATGAGGACAAAACTGGCCAAATGCCGGATGTAGTGCGCATTGCTCGCGAGAAGCTTGCATCATCAGTCGAAAGCGCTGTCATGGACACTGAGTGCGTCGCAATCGACCGGAGCACCGGAAGATTCAAGTCGTTTCAAGAGCTGTCGACGCGCTCACGAAGCGACATTGATGAGAGCGAGGTCAACGTTGCGGTTGCAATATACGTGTTTGACATGATGTATCTTAATGGTGAATCACTTGTGGACAGACCCTTAGCTGAGAGGCGCTCCTTTGCTAAAGCGAGTCTTCATCATGTGGCAAACGAAATGCAGTTGGCAGAGAGCGAGGAGATTAGCGAAGACACCCCTCAAGAAGAATGTGAGGATAAAGTCACAAGCTTGTTGCACTCCAGCCTGTCGCAGCAGGGCGAAGGCTTGATGTTGAAGAAGCTCAACCAGCCTGGAGCGCTCTATGAACCAGGCCGTCGCTCAGAGAGCTGGATGAAGGCGCGCATGACGATATGGAATGTGTCACTCACCGGAACTGTGTTCGTGACTTCTTCTCTCTTTAGCTTCTGA
PROTEIN sequence
Length: 320
MRLGANRISVLQAFGYATYLHHRFGPRKISTAEESPISKEDWNWAGSSVKRCFSLRPDLTTLLKCLIQGGIEKMLQECTLRPGLPVQPMLGQISRGIGHAVKQFNGALLAEFKYDGMRAQIHMTQDEMKVFSRKNEDKTGQMPDVVRIAREKLASSVESAVMDTECVAIDRSTGRFKSFQELSTRSRSDIDESEVNVAVAIYVFDMMYLNGESLVDRPLAERRSFAKASLHHVANEMQLAESEEISEDTPQEECEDKVTSLLHSSLSQQGEGLMLKKLNQPGALYEPGRRSESWMKARMTIWNVSLTGTVFVTSSLFSF*