ggKbase home page

sw_8_scaffold_6140_1

Organism: SW_8_Viridiplantae_55_9

partial RP 28 / 55 MC: 12 BSCG 18 / 51 MC: 4 ASCG 13 / 38 MC: 2
Location: comp(106..2076)

Top 3 Functional Annotations

Value Algorithm Source
Uncharacterized protein n=1 Tax=Amborella trichopoda RepID=U5CNX9_AMBTC similarity UNIREF
DB: UNIREF100
  • Identity: 43.0
  • Coverage: 544.0
  • Bit_score: 404
  • Evalue 1.90e-109
Uncharacterized protein {ECO:0000313|EMBL:ERN14871.1}; TaxID=13333 species="Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; basal Magnoliophyta; Ambore similarity UNIPROT
DB: UniProtKB
  • Identity: 43.0
  • Coverage: 544.0
  • Bit_score: 404
  • Evalue 2.70e-109
AAA family ATPase, CDC48 subfamily similarity KEGG
DB: KEGG
  • Identity: 33.9
  • Coverage: 542.0
  • Bit_score: 297
  • Evalue 7.10e-78

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Amborella trichopoda → Amborella → Amborellales → Streptophyta → Viridiplantae

Sequences

DNA sequence
Length: 1971
GCACTCGTCGCCGGCGTCGGCTCCGGCCGGATAAAGTCGTTCTATCGGGTGTTGTTCATCATTCCGATGGCCGTCGCCCCCGTCTCGCTCGGGGGAATCGTCGCCGGCAAGGGGGCCGCGATGGCGGTGCTCGCGCCGGCACAGGCCGCGCTGTGGCTCGCACTGCTCGCGCTCAACGACATCGCCGTCTCGCACGTTGCCCCTCTGCTCGCGTACACCGCGGCGGTGTCGACCCTGCTCGTCGCCGCGGGCGTCGCGCTGGGGCTCGCCGTGCCGAACCGCGAGCGCGCACAGCAGCAACCGCAGAAGCCCGCACCCCAGCTCCCTCGCCCCGGAGGCATTCTCGTTGTTGGTGGGAAGGAGAGCGGCCGCACCGCCTTCGCGCAAGCTGTGATGGACGAGCTCAAACGCAACGTTGGAAGCCTTGCCGTGAACGTGCAGATGAGCTGCCCTGCGCTGTACAAGCGCGAGCCACAGCAGGCGCGCGAGGCCATGATCCAGGGCGTGTCGGACGCAATTGCACGCGCACCCGCGGCCGTGTTCTTTGACGACATCGACAGCCTCTGCGCTGAGCAGCAGCAGCAGCAGCAGCAGTCCATCCAGCATCCCGAAGAGGGCGACTCCGGCGCTGCAATGCACGCGCACGACCTCGTGTCCATGATGGACATGTGCAATGCAGAGAAAAATTGGCGCACCCGTCCTGTGGTGTACATCGCCACTGCGAAATCCAGCGACAGCCTGCCAAAGGCCCTCACTGCTAGCCTCCGCTTCCAGCGCACTGTTGAGCTTCCGTCAGTGCCTGTTGAGCAATGCGGAATATTGCTCGAGCGCGAAGCTGCGCGTCGTGGGCTCAAGCTTGCTGGCGTGGAGGAGAGCACAACCAAGCAGCTGGAGGGCTTCACTGCACCGGACGTCCGTCACGCCGTTGACAGAGCAGTTCATGCGTCCGCGTCGCGGCTGCTCGGCCAGAAGGCGCCCTCGCTCACTGAGCAGGATGTGCGAGAGGGTGTGAAGGGCGTGCTGCCAGCGGGCGTTCGCTCGCTGGGCGCATCGCAAAACCGCAACAACGCTGAGAAGGCCGGATGGGCCCTCGTCGGAGGCATGCAACAGGTGCGAGACTCGCTCTCCGAGCAGCTCGAGCTGCCAACGAAGCACGCACACGTTTTCAAGGGCGCGCCCATCCGGCTGCCGACGGGTGCAATGCTCTACGGCCCGCCAGGCAGCGGCAAAACGCTTGCTGCGAAGGCGGCGGCGCACTCCGCCAACTTGCGGCTAGTGAGCATCAAAGGCCCGGAGCTGCTGAACAAGTACATCGGTGCGAGCGAAGCGAGCGTCCGCAGCCTTTTCCAGCGCGCACGCGCTGCTGCTCCCTGCGTTCTGTTCTTTGATGAGTTTGACGCAATCGCACCGCGAAGAGGAAACGACAATACCGGTGTGACTGACCGCGTGGTGAACCAGCTGCTCACCGAGCTTGACGGCGTTGAGTCGCTTGCTGGCGTGTATGTGCTTGCGGCGACGAGTCGGCCAGACCTGATCGATTCTGCGCTGCTGCGCCCTGGAAGGCTGGATCGCATGCTCTATTGTGGCTTCCCCACGGAAAAGGACCGAATGGAGGTTTTGCAGGCGCTTGCGAGCGGTGCAAATCTTGCAAACGATGTCAATCTGCAGCAGGTCGCATCCCAGACCAGTGGCATGAGTGGTGCCGATCTCAAGGGGCTGTTGACGGATGCGCAGCTCGCGGCGCTTGAAGAGCTTGGTTCTTCCGACCAGGACTCAGATGAGCTCCCGCCGGTGAAGCAGAAGCACATAGACAAGGCGCTGTCAAACGCGCGCATCTCCCTCTCACCGTCCGAGCGGCAGCAGCTGGAGGTGATCTACAACGATTTCCAGGCGACCCGATCTTCCGGTGGCTTCGATAAGACCTGGTCGGAAGCGCACTCGCGCATGGGCACGAAGAGCGCACTGTACTAG
PROTEIN sequence
Length: 657
ALVAGVGSGRIKSFYRVLFIIPMAVAPVSLGGIVAGKGAAMAVLAPAQAALWLALLALNDIAVSHVAPLLAYTAAVSTLLVAAGVALGLAVPNRERAQQQPQKPAPQLPRPGGILVVGGKESGRTAFAQAVMDELKRNVGSLAVNVQMSCPALYKREPQQAREAMIQGVSDAIARAPAAVFFDDIDSLCAEQQQQQQQSIQHPEEGDSGAAMHAHDLVSMMDMCNAEKNWRTRPVVYIATAKSSDSLPKALTASLRFQRTVELPSVPVEQCGILLEREAARRGLKLAGVEESTTKQLEGFTAPDVRHAVDRAVHASASRLLGQKAPSLTEQDVREGVKGVLPAGVRSLGASQNRNNAEKAGWALVGGMQQVRDSLSEQLELPTKHAHVFKGAPIRLPTGAMLYGPPGSGKTLAAKAAAHSANLRLVSIKGPELLNKYIGASEASVRSLFQRARAAAPCVLFFDEFDAIAPRRGNDNTGVTDRVVNQLLTELDGVESLAGVYVLAATSRPDLIDSALLRPGRLDRMLYCGFPTEKDRMEVLQALASGANLANDVNLQQVASQTSGMSGADLKGLLTDAQLAALEELGSSDQDSDELPPVKQKHIDKALSNARISLSPSERQQLEVIYNDFQATRSSGGFDKTWSEAHSRMGTKSALY*