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sw_8_scaffold_7203_1

Organism: SW_8_Viridiplantae_55_9

partial RP 28 / 55 MC: 12 BSCG 18 / 51 MC: 4 ASCG 13 / 38 MC: 2
Location: 1..1740

Top 3 Functional Annotations

Value Algorithm Source
Eukaryotic translation initiation factor 3 subunit C n=1 Tax=Physcomitrella patens subsp. patens RepID=A9SAG5_PHYPA similarity UNIREF
DB: UNIREF100
  • Identity: 39.6
  • Coverage: 578.0
  • Bit_score: 409
  • Evalue 5.30e-111
hypothetical protein; K03252 translation initiation factor 3 subunit C similarity KEGG
DB: KEGG
  • Identity: 39.6
  • Coverage: 578.0
  • Bit_score: 409
  • Evalue 1.70e-111
Eukaryotic translation initiation factor 3 subunit C {ECO:0000256|HAMAP-Rule:MF_03002}; Short=eIF3c {ECO:0000256|HAMAP-Rule:MF_03002};; Eukaryotic translation initiation factor 3 subunit 8 {ECO:000025 similarity UNIPROT
DB: UniProtKB
  • Identity: 39.6
  • Coverage: 578.0
  • Bit_score: 409
  • Evalue 7.40e-111

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Taxonomy

Physcomitrella patens → Physcomitrella → Funariales → Funariidae → Streptophyta → Viridiplantae

Sequences

DNA sequence
Length: 1740
AGGAGCAAGACGTACGAGGTGTACGGCAATGTCATTTCATACGTCGAGCGATTGGACGACGAACACTTCAAGACACTGCAATGCACTGAGCCGCACTCTCCCGAGTTTGTTGAGTGCATGCGCGACGAGCTGCCTCTACTTCAGCTCATGAGTGACACCGCCGAATATGCCGCACGTGTGGGTGATTACGTCGGCCATGCACGACTTGCCCAGCGTCAGATTGAGCACCTGTACTTCAAGCCCGAGCATGCGTACGAGTCAATGATCTCGCTAAGTGAGGAGCGACAGCGTGAGATGAAGGATAGCGAGTCTGCGAGCGTTGACACGACCGTCGCCAATGGCCTCTACATCCCAGCAAAGCTAAGTCACCCATGGAAGCATAACAGCTGTACCGAGGCGCTGCACAGTCTTTCTGCTACCGTCTTTGAGCGGACTAGCGAGAGCGCCAATCGGCGATTGCGCGCCCGCACGATGCTTGCGTTGTGTTATCACGCGGCTCTCAGGGGTGACTACAGAACTGCGCGTGAGACCATGATGGTATCACATGTACAGGAGGATGTGAGCTCGATGGACTTGAGCACCATGGTGCTCTTCAACCGCGCGATGGCGCAGCTTGGCGTGGCGGCATGTGCCTCTGGGCTCTTTTCCGACGCTGCGTCCTGCCTTGCAGAGCTGCACGCGTCGTCGCGCATCCGTGAACTGCTTGCGCAAGGTAGCCCACCGCAGCGGTACCAGGACCGCACTGCCGAGCAGGAGCGTGAGGAGCGGAAGCGCCAGATGCCATTTCACATGCACATCAACCTGGATCTGCTTGAGTGCGTGCACTTGACAAGCGCGATGCTGGTGGAGGTTGCAGGGATGGCTGCAAACGCTGTCGACTTTGTGCACGGCAGGAGCACGAACCGTATGTTTCAACGGCAGCTGGACTTATACGAAAAACAAACATTCCTGGGTCCACCAGAGAGCGCGCGTGATCACATCATGGCGTCGACCCTTGCGCTCCTTAGAGGCGACTGGGAGCGCGCGTCCTCACTCATACGATCGCTGTCTGTTTGGGATCTGTTACCGGTCAGCAGTAAGGAGGATATGCTGCAGATAATGGACGAGCGCATAAAGAGAGAGAGCTTGAAGGCGTACTTGCTCTCGCAATGCGCGCACTACCGCTCGTTGTCGCTTTCAACGCTGGCAGAGTCGTTCGAGTTGGAGCAGGATGCAGTGTATGCAACTGTGTCGCGGATGATTGTGGGCAATGAGCTGCACGCAACGCTGGACCAGCCGTCGGAGGCGCTGGTGCTAGAGCATGTGAAGCCATCGAGGCTGCAATCCCTGTCGGTTGCATACGCTGACAAGCTGGGTGTATTGGTGGAGCAGAACGAGAAAGCAGCGGACATCAAGACCGGGGGTTCGGAGTTCAGCGGCGGGCGGCACGGCGGGGAGAAGCAGCAGCAGTTCCAGGGCGAGCGAGATCAGCAGAAAAAAGGGTTGGCAAGCAGGGGACCGAAGGCGGTAGCACCAGCACAGGGAAGTAGCAGACGAGCGGCAGTGGGAAGAGCAGGCGCTACACGGCAGCAAGCGCAGGCACCACAGCAGCAGAGCAACAACCAGCAGCAAAGCCAGCAAGGTCAGGCAAATGGTGGTGATCAGCAGTCGGCAGCAGCGGCGGCGCAGCAGTCGCAGGAGCGCCAGTTCACCTCGCTAGGACGTGCGACACCACAGGGATCGGCGCGGCCGAATCAATAG
PROTEIN sequence
Length: 580
RSKTYEVYGNVISYVERLDDEHFKTLQCTEPHSPEFVECMRDELPLLQLMSDTAEYAARVGDYVGHARLAQRQIEHLYFKPEHAYESMISLSEERQREMKDSESASVDTTVANGLYIPAKLSHPWKHNSCTEALHSLSATVFERTSESANRRLRARTMLALCYHAALRGDYRTARETMMVSHVQEDVSSMDLSTMVLFNRAMAQLGVAACASGLFSDAASCLAELHASSRIRELLAQGSPPQRYQDRTAEQEREERKRQMPFHMHINLDLLECVHLTSAMLVEVAGMAANAVDFVHGRSTNRMFQRQLDLYEKQTFLGPPESARDHIMASTLALLRGDWERASSLIRSLSVWDLLPVSSKEDMLQIMDERIKRESLKAYLLSQCAHYRSLSLSTLAESFELEQDAVYATVSRMIVGNELHATLDQPSEALVLEHVKPSRLQSLSVAYADKLGVLVEQNEKAADIKTGGSEFSGGRHGGEKQQQFQGERDQQKKGLASRGPKAVAPAQGSSRRAAVGRAGATRQQAQAPQQQSNNQQQSQQGQANGGDQQSAAAAAQQSQERQFTSLGRATPQGSARPNQ*