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sw_8_scaffold_7469_4

Organism: SW_8_Viridiplantae_55_9

partial RP 28 / 55 MC: 12 BSCG 18 / 51 MC: 4 ASCG 13 / 38 MC: 2
Location: 2666..3841

Top 3 Functional Annotations

Value Algorithm Source
Chromo domain protein, putative n=1 Tax=Ricinus communis RepID=B9RDU3_RICCO similarity UNIREF
DB: UNIREF100
  • Identity: 42.9
  • Coverage: 375.0
  • Bit_score: 280
  • Evalue 3.30e-72
Uncharacterized protein {ECO:0000313|EMBL:KJB49475.1}; TaxID=29730 species="Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; similarity UNIPROT
DB: UniProtKB
  • Identity: 41.5
  • Coverage: 402.0
  • Bit_score: 280
  • Evalue 4.60e-72
SNF2-like protein similarity KEGG
DB: KEGG
  • Identity: 39.4
  • Coverage: 142.0
  • Bit_score: 103
  • Evalue 1.50e-19

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Taxonomy

Gossypium raimondii → Gossypium → Malvales → rosids → Streptophyta → Viridiplantae

Sequences

DNA sequence
Length: 1176
ATGTTGCCCAAGCTTTTCAAAGCAGGGCACAAGGTGCTTCTTTTTTCATCAATGACGCAATTGCTAGATGTGCTCGAGCTCTACCTGCAGTGGCGCTTTGTGGATGGCAAACCACTTCAATACAGACGACTCGATGGGAGCACCTCTTTTTCAGATCGAGAAAGAGCAGTTGAGGCGTTCAATGCACAAGAAAGCCAGGACTTCATATTTTTGCTGAGCATTCGAGCTGCTGGTCGGGGCTTAAACCTCCAGAGCGCTGATACAGTGGTTGTGTACGACCCAGACCCAAACCCAAAGAATGAAGAGCAAGCTATCGCTCGGGCCCACCGCATCGGGCAGCAGCGCGAGGTGCGCGTGTACCACCTCGAATCCGTTGTCGAAGACCGGCGCGATGATGAGAGCGAAGAAACGAGTGAGCTTGAGCCGTTTGGGCGCAACAAGCTCTCTGTTTATTCGATGGGCCACACGAAACGCGAGTACAGAAAGTCCGTTGAGACGCTGCTACGCGAGAACATCCAGCAGATGAAGGTCGAGATGGCTGACGAGGTGATTGATGCAGGCCGATTCGACCAGCGGACGTCGAACAAGACCAGGGAGCAGCAGCTCGAAGCACTCCTAAATGAGCGAGCTAAGTACAAGGACACATCTGAGCAGCGTGTCCCGAGTTTGCAGGAGATGAACAAGCTGCTTGCGCGGAGCGAGGCTGAGCTCAAGATGTTCCAACAAATGGACGAGAGCGAGTGTGCGCTAGACACATCAATCGCGAACAACGGCTCGGGGAAAGGCGATTACTGGCTGCCGCAGCCGATGCTCGCGGGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTGCAGCAGCAAAAGGCGGACGGAGCATGGCAGTAGCAGAGGACGAGCAGCTGAGCAGGAGCGCAAGAACTACGAGGCCGCAGATGGGACAGTTGCAAGAGGCTGGCAATGAGTTTGAAGGTGAAGAGCAGGACGACGCGGAGGCGCAAGACGAGGCGAGAGTTGACGATGTGGCGGACGAGGATCCAAGCCATGTTCTGGCAGCATCTCAGGATGGGCAGGGAGACTCGCAGGAGCAGGACGCGGTGCTATTAGCGCCAGTGCGGGATGATGAGGCGCTGAGCATGGGCGCGGAGACATCGCTGCTGTACTAA
PROTEIN sequence
Length: 392
MLPKLFKAGHKVLLFSSMTQLLDVLELYLQWRFVDGKPLQYRRLDGSTSFSDRERAVEAFNAQESQDFIFLLSIRAAGRGLNLQSADTVVVYDPDPNPKNEEQAIARAHRIGQQREVRVYHLESVVEDRRDDESEETSELEPFGRNKLSVYSMGHTKREYRKSVETLLRENIQQMKVEMADEVIDAGRFDQRTSNKTREQQLEALLNERAKYKDTSEQRVPSLQEMNKLLARSEAELKMFQQMDESECALDTSIANNGSGKGDYWLPQPMLAXXXXXXXXXXXXXXXXAAAKGGRSMAVAEDEQLSRSARTTRPQMGQLQEAGNEFEGEEQDDAEAQDEARVDDVADEDPSHVLAASQDGQGDSQEQDAVLLAPVRDDEALSMGAETSLLY*