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sw_8_scaffold_9234_2

Organism: SW_8_Viridiplantae_55_9

partial RP 28 / 55 MC: 12 BSCG 18 / 51 MC: 4 ASCG 13 / 38 MC: 2
Location: comp(648..1115)

Top 3 Functional Annotations

Value Algorithm Source
RBP11-like subunits of RNA polymerase n=1 Tax=Coccomyxa subellipsoidea C-169 RepID=I0YUK2_9CHLO similarity UNIREF
DB: UNIREF100
  • Identity: 59.6
  • Coverage: 57.0
  • Bit_score: 76
  • Evalue 2.20e-11
RBP11-like subunits of RNA polymerase {ECO:0000313|EMBL:EIE22071.1}; TaxID=574566 species="Eukaryota; Viridiplantae; Chlorophyta; Trebouxiophyceae; Coccomyxaceae; Coccomyxa.;" source="Coccomyxa subell similarity UNIPROT
DB: UniProtKB
  • Identity: 59.6
  • Coverage: 57.0
  • Bit_score: 76
  • Evalue 3.00e-11
rpc19; putative RNA polymerase III subunit similarity KEGG
DB: KEGG
  • Identity: 44.3
  • Coverage: 79.0
  • Bit_score: 71
  • Evalue 2.20e-10

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Taxonomy

Coccomyxa subellipsoidea → Coccomyxa → Trebouxiophyceae → Chlorophyta → Viridiplantae

Sequences

DNA sequence
Length: 468
ATGCTCGGAACGCGGGAGCTTGGAGCGCTCAGACTCGCTGGCGGGCTCGGCGTAGTTGTCGGAAAGAGCAGTAATGTGTTGCGCAGGCGGTTGGTCCCTCTCGGAGGGCTGGATACTGAGACTCGGCTTCTGTTCCTTGTGCTTGGCGCTTTTCGACTTCTTCACACTAAATTGCATCAACCTGAGAATACTCCAGTGAACGGCTTACAAATGGCCGCGGAGCCTTGTGCTGACGAGAGGGCCTGTCAGGCAACCTTTGTGCTCAGTGGGGAAGGTCACACGCTCGCCAACCCTCTGAAGCACCAACTCAACCGCAGCCCTCATGTGGAGCTTGCCGGGTACAGCGTACCCCACTATAGCGAGAACGCCGTTAATGTCCGCGTCCAAACCACCGGTGAAGCCTCCGCCAAAGACGTCATGCTGTGTGTACAATCCAATTTCTTGTCGCTCCGCTCATGTGAACGGTGA
PROTEIN sequence
Length: 156
MLGTRELGALRLAGGLGVVVGKSSNVLRRRLVPLGGLDTETRLLFLVLGAFRLLHTKLHQPENTPVNGLQMAAEPCADERACQATFVLSGEGHTLANPLKHQLNRSPHVELAGYSVPHYSENAVNVRVQTTGEASAKDVMLCVQSNFLSLRSCER*