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sw_8_scaffold_988_3

Organism: SW_8_Viridiplantae_55_9

partial RP 28 / 55 MC: 12 BSCG 18 / 51 MC: 4 ASCG 13 / 38 MC: 2
Location: comp(1361..3055)

Top 3 Functional Annotations

Value Algorithm Source
DNA-directed RNA polymerase {ECO:0000256|RuleBase:RU000431}; EC=2.7.7.6 {ECO:0000256|RuleBase:RU000431};; TaxID=296587 species="Eukaryota; Viridiplantae; Chlorophyta; prasinophytes; Mamiellophyceae; M similarity UNIPROT
DB: UniProtKB
  • Identity: 50.9
  • Coverage: 582.0
  • Bit_score: 555
  • Evalue 6.20e-155
DNA-directed RNA polymerase n=1 Tax=Micromonas sp. (strain RCC299 / NOUM17) RepID=C1FDM4_MICSR similarity UNIREF
DB: UNIREF100
  • Identity: 50.9
  • Coverage: 582.0
  • Bit_score: 555
  • Evalue 4.40e-155
DNA-directed RNA polymerase subunit beta similarity KEGG
DB: KEGG
  • Identity: 36.1
  • Coverage: 593.0
  • Bit_score: 344
  • Evalue 7.50e-92

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Taxonomy

Micromonas sp. RCC299 → Micromonas → Mamiellales → Mamiellophyceae → Chlorophyta → Viridiplantae

Sequences

DNA sequence
Length: 1695
ATGGCTCGTATCATGCGGCCGGTGATAAATCTCAATCGCAAGGAAGTGGAGTACATCGGTACTTTAGAACAACCTTTCATGGACATTGCCTGTCCTGATCCGTCTAGAAAAGACGTTGCCGAGTTGCAGGCGACGCATGAGGAGCTCGGTAAGCGCAAATACACTGTACAAGCCGTCATTCATTCGCATGAAACCTTCCTGGGCCCTTTTTGTGCACACACAGGTCCCAACAGCATTTTGAGTGCAGTCGCTTCCCTCACGCCATGGTCTGAGTTCAACCAGAGCCCGCGGAACATGTATCAGTGCCAGATGGCGAAGCAAACGATGGGATTTCCTGTGCATAGTTTTCGTCATCGTCACGATAACAAGATGTACATGCTGGAGACGCCGCAGAAGCCGCTTGCGAGAAGTGAGCAGGAGGATAAGCTCCATGTGAACGAATATCCTCAGGGCTTCAATGGGATTGTGGCTGTCATTTCGTACACTGGCTACGACATGGAAGACGCAATGATTGTGAACAAAGGAAGCATGGAGCGAGGGCTCGGCCGTGGGACGCTATACACCAGCGAGACAATATCAGTCGCGCAATCGCAGAGGAAGAATGCAGAGCCAGAGTCACTCGCACGCCCTGAGTTACGCGAAGGACAAGAGCGCAGACCAAAGGAGTTTTCGAACATTGATGCAGATGGCTTGCCAGCGCCCGGTCAGTCAATCGGTGTTGGAAACGTATATGCAACTAGCATTGGCGCAATTTCTGGTAAGGTGAAATCATACATCCTGAAAGACTCGGACGATGCGTACGTCGATCAAGTCACGCTGCTTGGCGATGACCAAAGATATGCAGCGCAAAGCGGAGCGAATATCAAGAAGCGGTTCCCACGCAGGCCCATCATCGGTGATAAATTCAGCAGCAGGCATGGCCAGAAGGGCACTCTAAGTCTTTTGTATCCTGAAGAAGATATGCCATACATCGAAGGCACTGGAGTTCGTCCGGACATCCTCATAAACCCCAATGCCTTTCCGTCGCGCATGACAATCGGCATGCTCATTGAGAGCTTTGCGTCAAAAGCTGGCGCCCTTCGAGGCGAGAGTGTGGACGCAACAACCTTTAAGAAATGTACCCGCGGAAAGGAAACATCCGATCCAGTTATGGACTTCGTGGAGCTCCTTCAGAACGAGGGGTATCAGAAGTACGGCGGCGAAACTATGGTCTGCGGCGTAACAGGGGAGCTGCTTCACGTTGATGTTTTTATCGGGCTTGTCTACTATCAGAGACTGCGTCATATGGTGTCAGACAAGTTTCAAGTTCGCACTCTGGGTCCGATAAGCAATTTGACGCACCAACCAGTTAAGGGCCGCAAGGCTGGTGGCGGAATTCGTTTCGGTGAGATGGAGCGAGACGCGCTAATTGCCCACGGCGCATCATATCTGCTGCATGACCGCCTTCACCTGTGCTCCGACCGCCATCTCGCTGATGTGTGCCGCAATTGCGGCACTTTTTTGTCGACTACGAGAGTGCCTGCGACGTCTTCCGATCTGAGAGGAGACCCTACCGGGCGTGATAGCGATCGGATTGAATGCATGCTTTGCAAGAGCAAAGAAAGTGTCGAGAAAGTTGCTCTGCCGTATGTGTTCCGCTATTTGGTGGTTGAATTAGCGGCGATGAATGTGAAAATGACGATGAGCGTGAGATGA
PROTEIN sequence
Length: 565
MARIMRPVINLNRKEVEYIGTLEQPFMDIACPDPSRKDVAELQATHEELGKRKYTVQAVIHSHETFLGPFCAHTGPNSILSAVASLTPWSEFNQSPRNMYQCQMAKQTMGFPVHSFRHRHDNKMYMLETPQKPLARSEQEDKLHVNEYPQGFNGIVAVISYTGYDMEDAMIVNKGSMERGLGRGTLYTSETISVAQSQRKNAEPESLARPELREGQERRPKEFSNIDADGLPAPGQSIGVGNVYATSIGAISGKVKSYILKDSDDAYVDQVTLLGDDQRYAAQSGANIKKRFPRRPIIGDKFSSRHGQKGTLSLLYPEEDMPYIEGTGVRPDILINPNAFPSRMTIGMLIESFASKAGALRGESVDATTFKKCTRGKETSDPVMDFVELLQNEGYQKYGGETMVCGVTGELLHVDVFIGLVYYQRLRHMVSDKFQVRTLGPISNLTHQPVKGRKAGGGIRFGEMERDALIAHGASYLLHDRLHLCSDRHLADVCRNCGTFLSTTRVPATSSDLRGDPTGRDSDRIECMLCKSKESVEKVALPYVFRYLVVELAAMNVKMTMSVR*