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sw_8_scaffold_9997_4

Organism: SW_8_Viridiplantae_55_9

partial RP 28 / 55 MC: 12 BSCG 18 / 51 MC: 4 ASCG 13 / 38 MC: 2
Location: comp(1842..2516)

Top 3 Functional Annotations

Value Algorithm Source
Uncharacterized protein n=1 Tax=Capsella rubella RepID=R0GU49_9BRAS similarity UNIREF
DB: UNIREF100
  • Identity: 38.9
  • Coverage: 221.0
  • Bit_score: 169
  • Evalue 4.60e-39
Uncharacterized protein {ECO:0000313|EMBL:EOA14703.1}; TaxID=81985 species="Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; similarity UNIPROT
DB: UniProtKB
  • Identity: 38.9
  • Coverage: 221.0
  • Bit_score: 169
  • Evalue 6.50e-39
replication protein A 70 kDa DNA-binding subunit-like similarity KEGG
DB: KEGG
  • Identity: 41.5
  • Coverage: 205.0
  • Bit_score: 161
  • Evalue 3.00e-37

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Taxonomy

Capsella rubella → Capsella → Brassicales → rosids → Streptophyta → Viridiplantae

Sequences

DNA sequence
Length: 675
ATGGCACNNNNNNNNNNNNAGCATGCTTACGGCAACGCCTACTCCGGCGTGACCTCCTACGGCCAGGACAGGCAGCAGCCGTCCCACGCCGGGATGGATCAAGGCCCCACGCGGCAGTTCTACCAGGCGCAAGGTGGCCCCACTGCAAAGAACCAAGCGCCTCCTCAGATTACACCTGTGAAGATGCTCAACCCGTACCAAGGGCGTTGGACAATTGAGGTTCGCGTGACGGCTGTTGGGAGCATCAAGACATTCTCAAAGCAGGGCTCCACCGGCAGAGTGCAGAATTACGACGTCGTCGACGCGCACAAGGATGAGATCCGCTGCGTTGCGTTCAACGAAACCATTGACCATTTCAGCAGCCTGTTCGAAAAAGGCAAAACGCTTCGGATATCAAAAGGCTCGCTTGTTCAGGCGAACCCGAAGTTCAACAACCTCAACACTGACTACGAGATCCGGCTGGACAAGAATTCAGTTGTTGAGGAGATGTCAGATCAAGGCAGCATCCCGAGCATGTCCTTCAACTTCAGAAGTATCGCCGACCTTGAGCACACAGAGGTGGGCGTTACCATCGACATCATCGGCATCGCCACGTCAGCGCGCGATGTGGCTGACATCGTCCGTAAGGATGGCAGCCAGACGAGAAAGCGCGATGTCACACTGGTTGAAAGTTAA
PROTEIN sequence
Length: 225
MAXXXXXHAYGNAYSGVTSYGQDRQQPSHAGMDQGPTRQFYQAQGGPTAKNQAPPQITPVKMLNPYQGRWTIEVRVTAVGSIKTFSKQGSTGRVQNYDVVDAHKDEIRCVAFNETIDHFSSLFEKGKTLRISKGSLVQANPKFNNLNTDYEIRLDKNSVVEEMSDQGSIPSMSFNFRSIADLEHTEVGVTIDIIGIATSARDVADIVRKDGSQTRKRDVTLVES*