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sw_9_scaffold_1853_4

Organism: SW_9_UNK

partial RP 46 / 55 MC: 39 BSCG 39 / 51 MC: 36 ASCG 38 / 38 MC: 38
Location: comp(1916..2842)

Top 3 Functional Annotations

Value Algorithm Source
Transcription initiation factor IIB n=1 Tax=Haloferax volcanii (strain ATCC 29605 / DSM 3757 / JCM 8879 / NBRC 14742 / NCIMB 2012 / VKM B-1768 / DS2) RepID=D4GQ57_HALVD similarity UNIREF
DB: UNIREF100
  • Identity: 79.9
  • Coverage: 308.0
  • Bit_score: 519
  • Evalue 1.90e-144
tfb9; transcription initiation factor TFB similarity KEGG
DB: KEGG
  • Identity: 79.9
  • Coverage: 308.0
  • Bit_score: 519
  • Evalue 5.40e-145
Transcription initiation factor IIB {ECO:0000256|HAMAP-Rule:MF_00383}; Short=TFIIB {ECO:0000256|HAMAP-Rule:MF_00383};; TaxID=309800 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Halofe similarity UNIPROT
DB: UniProtKB
  • Identity: 79.9
  • Coverage: 308.0
  • Bit_score: 519
  • Evalue 2.70e-144

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Taxonomy

Haloferax volcanii → Haloferax → Haloferacales → Halobacteria → Euryarchaeota → Archaea

Sequences

DNA sequence
Length: 927
ATGGCAACCAGAGATATCTACGAAACTGGATTTGACGAGGAAATCCAGACAGACTCAAGCACAAACCAGTGTCCCGAGTGCAACGGCAGGGTTACCACGAACGTGAAGGAAACCGTCTGCGAGGACTGCGGACTCGTCATCGAAGAGCAGCGTCTCGATCATGGCCCTGAATGGCGGGCATTCGATAAAGACGAGCGCAAGCGGACGGGCGCACCGCTGACGACAGCCCGCCACGACCGCGGCCTCTCGACCGAGATCGGTCGGCGAACCGACGGGAAAGGGAACAAACTCTCGGGACAGAAGCGCCGGCGACTGTCCCGGATGCGCCGCGAGCAGACCCGTGGCCGGTGGCGGTCGACGGCCGAGCGGAATCTCGCACACGGACTCGGAGAGGTGCAGCGCCTCGCCAGTGCCCTTGATCTCTCCAAGTCGCTTCGCGACCAGGCCTGCCAGCTGTTCCGGAGCGCTCAGCAGGAGAATCTGCTTCGTGGCAGATCCATCGAAGCGATTGCCGCAGCCAGCGTCTACGGTGCCTGCCGATGCAACGGTCGGTCGCAACTCCTTGACGACATCGTGGCGGTCGCGAAGGTCGGGGAATCGCAGGTTACGAACGCATACAAGACACTCAACGAAGAGCTGGGACTTCCGGCCAAACCTGCGACTCCGACGATGTACATTCCGCGGCTCGCATCCGAACTCGACTGCCCGGATCGAATCCGGCGGCGGGCGCGGGTACTTGCTGAAGAAGCTGAGGACGCCGGTGTGACGACGGGCGTCCATCCTGCCGGCTTCGCAGCGGCCTGCCTCTACAAAGCAGGGCAAGAACAGGGGAAGTGGGTGACGCAAAGTGACGTTGCAGCGGCCGGGAACGTCACGCCAACGACTGTCCGGACGCATCACGAGACGCTCGATGAACTCGCGATCTAG
PROTEIN sequence
Length: 309
MATRDIYETGFDEEIQTDSSTNQCPECNGRVTTNVKETVCEDCGLVIEEQRLDHGPEWRAFDKDERKRTGAPLTTARHDRGLSTEIGRRTDGKGNKLSGQKRRRLSRMRREQTRGRWRSTAERNLAHGLGEVQRLASALDLSKSLRDQACQLFRSAQQENLLRGRSIEAIAAASVYGACRCNGRSQLLDDIVAVAKVGESQVTNAYKTLNEELGLPAKPATPTMYIPRLASELDCPDRIRRRARVLAEEAEDAGVTTGVHPAGFAAACLYKAGQEQGKWVTQSDVAAAGNVTPTTVRTHHETLDELAI*