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SW_9_UNK

In projects: SW_9  |  diaphorachaeota

Metagenomic Context

METAGENOME

Properties

Avg. coverage: 18.95 Longest contig: 153.78 Kbp Bin length: 52.88 Mbp GC content: 60.44 %
Contigs count: 21657 Features count: 72021 rRNAs count: 14 tRNAs count: 753

Genome completeness

partial RP 46 / 55 MC: 39 BSCG 39 / 51 MC: 36 ASCG 38 / 38 MC: 38
Displaying items 151-200 of 21657 in total
contig # features sequence size GC content (%) Cov Coding Density (%)
sw_9_scaffold_20670
Species: Natronococcus occultus (50%)
2 1053 bp 42.17 3.80 43.02
sw_9_scaffold_13775
Species: RBG_16_Deltaproteobacteria_54_18_curated (50%)
2 1368 bp 43.71 3.80 70.61
sw_9_scaffold_23275 2 1921 bp 43.78 3.80 99.17
sw_9_scaffold_13007 3 1418 bp 40.27 3.81 78.91
sw_9_scaffold_9189
Order: Nostocales (66.67%)
3 1757 bp 43.54 3.81 79.91
sw_9_scaffold_17933
Domain: Bacteria (66.67%)
3 1156 bp 32.96 3.81 88.75
sw_9_scaffold_19347
Species: Haloferax mucosum (50%)
2 1102 bp 44.92 3.81 40.02
sw_9_scaffold_20061
Species: Halobacterium sp. DL1 (100%)
1 1074 bp 43.20 3.82 99.72
sw_9_scaffold_13871
Order: Halobacteriales (66.67%)
3 1362 bp 35.76 3.82 82.82
sw_9_scaffold_9712 3 1701 bp 33.39 3.82 96.30
sw_9_scaffold_21622
Species: Candidatus Halobonum tyrrellensis (50%)
2 1021 bp 39.76 3.82 92.26
sw_9_scaffold_32584 2 1437 bp 29.23 3.83 87.27
sw_9_scaffold_19430
Species: Natrialba aegyptia (100%)
1 1098 bp 40.89 3.83 66.12
sw_9_scaffold_15320
Phylum: Bacteroidetes (66.67%)
3 1280 bp 41.33 3.83 94.69
sw_9_scaffold_19483
Species: Salinibacter ruber (50%)
2 1096 bp 56.20 3.83 82.94
sw_9_scaffold_20181 1 1070 bp 51.21 3.83 90.28
sw_9_scaffold_13527
Species: Halococcus morrhuae (100%)
1 1385 bp 41.08 3.83 80.79
sw_9_scaffold_13156
Species: Pleurocapsa minor (100%)
2 1408 bp 50.21 3.84 97.59
sw_9_scaffold_16409 3 1851 bp 48.51 3.84 41.49
sw_9_scaffold_12113
Species: Haloarcula argentinensis (50%)
2 1485 bp 44.38 3.84 80.40
sw_9_scaffold_14023 3 1354 bp 48.60 3.84 79.32
sw_9_scaffold_10590
Domain: Bacteria (66.67%)
3 1615 bp 41.24 3.84 88.79
sw_9_scaffold_15449
Species: Emticicia oligotrophica (50%)
2 1274 bp 41.60 3.85 94.66
sw_9_scaffold_18236 3 1144 bp 37.50 3.85 89.69
sw_9_scaffold_19638 3 1090 bp 44.86 3.85 76.24
sw_9_scaffold_32699
Species: Fulvivirga imtechensis (50%)
2 1373 bp 43.12 3.86 93.74
sw_9_scaffold_17135
Species: Halorhabdus tiamatea (100%)
1 1191 bp 51.89 3.86 99.50
sw_9_scaffold_14146 4 1347 bp 37.42 3.86 84.41
sw_9_scaffold_21138 3 1037 bp 48.51 3.86 84.19
sw_9_scaffold_6308 4 2178 bp 38.11 3.86 75.62
sw_9_scaffold_16135 1 1239 bp 53.91 3.87 93.22
sw_9_scaffold_21233
Species: Haloferax elongans (50%)
2 1034 bp 45.94 3.87 81.53
sw_9_scaffold_17165
Species: Haloarcula sinaiiensis (50%)
2 1190 bp 48.99 3.87 88.49
sw_9_scaffold_22255
Species: Haloferax sp. ATCC BAA-646 (50%)
2 1653 bp 50.33 3.87 43.74
sw_9_scaffold_13765
Species: Paenibacillus sp. FSL R5-0912 (50%)
2 1888 bp 51.80 3.87 85.65
sw_9_scaffold_13319 2 1397 bp 46.81 3.87 53.26
sw_9_scaffold_34085 1 1419 bp 40.10 3.88 81.40
sw_9_scaffold_17827
Species: Halopiger xanaduensis (50%)
2 1161 bp 39.36 3.88 91.47
sw_9_scaffold_16694
Species: Stanieria cyanosphaera (100%)
1 1212 bp 46.62 3.88 76.98
sw_9_scaffold_13027
Species: GWF2_Bacteroidetes_35_48_curated (50%)
2 1417 bp 45.31 3.88 94.64
sw_9_scaffold_14245 3 1340 bp 40.00 3.88 51.72
sw_9_scaffold_22100
Species: RIFOXYD2_FULL_Sphingobacteria_35_12_curated (50%)
2 1005 bp 41.69 3.88 86.57
sw_9_scaffold_22170 1 1003 bp 53.94 3.89 99.90
sw_9_scaffold_13444 3 1389 bp 45.14 3.89 74.08
sw_9_scaffold_22200 1 1002 bp 48.70 3.89 100.00
sw_9_scaffold_20621 1 1054 bp 50.19 3.89 99.62
sw_9_scaffold_49201 2 1055 bp 37.54 3.89 85.31
sw_9_scaffold_20669 2 1053 bp 47.01 3.89 84.62
sw_9_scaffold_39710 3 1207 bp 39.77 3.89 80.28
sw_9_scaffold_45955
Species: GWA2_Bacteroidetes_40_15_curated (100%)
1 1028 bp 60.51 3.89 66.54
Displaying items 151-200 of 21657 in total

Ribosomal proteins shown here were identified using keyword searches of all annotations.

The SCGs are found by conducting USEARCH with a custom database.

The SCGs are found by conducting USEARCH with a custom database.