ggKbase home page

sw_9_scaffold_434_26

Organism: SW_9_Halococcus_67_24

near complete RP 28 / 55 MC: 5 BSCG 25 / 51 MC: 3 ASCG 38 / 38 MC: 3
Location: comp(24277..24612)

Top 3 Functional Annotations

Value Algorithm Source
Ribonuclease VapC n=1 Tax=Halorubrum kocurii JCM 14978 RepID=M0PBE9_9EURY similarity UNIREF
DB: UNIREF100
  • Identity: 63.1
  • Coverage: 111.0
  • Bit_score: 143
  • Evalue 1.80e-31
Twitching motility protein PilT {ECO:0000313|EMBL:KKF39380.1}; TaxID=2248 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halorubrum.;" source="Halorubrum saccharovorum.; similarity UNIPROT
DB: UniProtKB
  • Identity: 65.8
  • Coverage: 111.0
  • Bit_score: 147
  • Evalue 1.00e-32
putative nucleic acid-binding protein, contains PIN domain similarity KEGG
DB: KEGG
  • Identity: 61.3
  • Coverage: 111.0
  • Bit_score: 137
  • Evalue 2.10e-30

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Halorubrum saccharovorum → Halorubrum → Haloferacales → Halobacteria → Euryarchaeota → Archaea

Sequences

DNA sequence
Length: 336
GTGGATTACGTCGTGGATCGTTTCGACGAGCGGGCGATCGCTCCGCCGTTGGTGCTGCTCGGAGTCTATCAAGGAGAGGTGTTCAAATCGGGACCGACCGACTTCGATGCCGTTGACGGTGCTCTTGGGTGGCTGACCGTCGTGGACGAAACGCCGGCGATCGCGCGCGCAGCCGCCGAACTCCAGGCCTCGCTCCAGGAGACGGGCGAACCGCTCGCCGCACGCGACGCGTTCGTCGCCGGGGCAGCGAAGAGCCTCGACGAGCGGCTCGTCGTGGCCGATGCGGACTTCGACGTCGACGGCATCGCGCAGGCCCTCGACATCGATTTCGTCTGA
PROTEIN sequence
Length: 112
VDYVVDRFDERAIAPPLVLLGVYQGEVFKSGPTDFDAVDGALGWLTVVDETPAIARAAAELQASLQETGEPLAARDAFVAGAAKSLDERLVVADADFDVDGIAQALDIDFV*