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SW_9_Halobacteriales_66_12

In projects: SW_9  |  diaphorachaeota  |  archaea_ggkbase

Consensus taxonomy: Halobacteriales  →  Halobacteria  →  Euryarchaeota  →  Archaea

Taxonomy override: Euryarchaeota

Displaying items 1-50 of 92 in total
contig # features sequence size GC content (%) Cov Coding Density (%)
sw_9_scaffold_8625
Order: Halobacteriales (87.5%)
8 3016 bp 66.05 12.04 100.86
sw_9_scaffold_1760
Order: Halobacteriales (85.71%)
7 6160 bp 65.97 13.52 95.94
sw_9_scaffold_3449
Species: Natronomonas pharaonis (50%)
2 3067 bp 64.10 14.22 95.08
sw_9_scaffold_7464
Order: Halobacteriales (100%)
9 4616 bp 65.84 13.50 94.17
sw_9_scaffold_844
Order: Halobacteriales (57.14%)
7 6714 bp 65.65 10.66 93.07
sw_9_scaffold_1428
Order: Halobacteriales (80%)
10 9560 bp 66.71 12.47 93.04
sw_9_scaffold_4801
Order: Halobacteriales (50%)
6 4463 bp 64.80 11.76 90.54
sw_9_scaffold_1175
Genus: Haloarcula (60%)
5 5536 bp 66.62 11.43 90.12
sw_9_scaffold_2870
Order: Halobacteriales (80%)
5 3405 bp 63.73 11.16 90.04
sw_9_scaffold_5730
Order: Halobacteriales (75%)
8 4464 bp 66.76 12.14 89.92
sw_9_scaffold_5510
Order: Halobacteriales (83.33%)
6 4556 bp 66.55 14.03 89.16
sw_9_scaffold_1093
Order: Halobacteriales (66.67%)
12 6854 bp 67.25 12.24 89.04
sw_9_scaffold_1759
Order: Halobacteriales (76.19%)
21 20622 bp 66.44 12.20 89.02
sw_9_scaffold_2026
Species: Halorhabdus utahensis (100%)
1 4147 bp 65.88 10.20 88.91
sw_9_scaffold_2863
Order: Halobacteriales (75%)
4 3412 bp 66.91 11.34 88.89
sw_9_scaffold_6751
Species: Halosimplex carlsbadense (50%)
4 4577 bp 67.45 10.97 88.49
sw_9_scaffold_4022
Order: Halobacteriales (66.67%)
6 5963 bp 67.13 11.10 88.45
sw_9_scaffold_6859
Species: halophilic archaeon J07HX64 (50%)
4 4079 bp 67.32 10.62 88.18
sw_9_scaffold_2921
Order: Halobacteriales (80%)
5 8047 bp 64.42 12.02 87.98
sw_9_scaffold_1650
Order: Halobacteriales (66.67%)
18 9022 bp 66.37 12.14 87.66
sw_9_scaffold_1115
Genus: Halococcus (50%)
4 6367 bp 66.53 10.38 87.45
sw_9_scaffold_1287
Order: Halobacteriales (90%)
10 7905 bp 65.67 14.56 86.60
sw_9_scaffold_5306
Order: Halobacteriales (62.5%)
8 3370 bp 64.66 9.94 86.44
sw_9_scaffold_8697
Species: Halosimplex carlsbadense (60%)
5 3370 bp 67.69 12.26 86.17
sw_9_scaffold_1673
Order: Halobacteriales (58.33%)
12 6932 bp 66.40 11.83 86.06
sw_9_scaffold_2288
Order: Halobacteriales (76.92%)
13 11844 bp 66.98 11.59 85.82
sw_9_scaffold_6531
Order: Halobacteriales (50%)
6 3434 bp 67.85 13.37 85.67
sw_9_scaffold_6520
Order: Halobacteriales (100%)
5 3601 bp 65.82 12.39 85.64
sw_9_scaffold_7340
Genus: Haloarcula (50%)
4 3909 bp 67.13 13.25 85.34
sw_9_scaffold_2839
Order: Halobacteriales (81.25%)
16 16495 bp 66.20 12.40 85.34
sw_9_scaffold_597
Order: Halobacteriales (81.82%)
11 13015 bp 66.48 12.21 85.29
sw_9_scaffold_1030
Order: Halobacteriales (75%)
16 13012 bp 67.35 11.89 85.17
sw_9_scaffold_798
Order: Halobacteriales (80%)
20 15437 bp 66.95 12.53 85.16
sw_9_scaffold_2952
Order: Halobacteriales (66.67%)
6 5578 bp 63.95 12.75 85.08
sw_9_scaffold_1110
Order: Halobacteriales (73.33%)
15 10556 bp 63.76 11.22 84.22
sw_9_scaffold_7345
Species: Halomicrobium mukohataei (57.14%)
7 5380 bp 65.74 10.95 84.09
sw_9_scaffold_2603
Order: Halobacteriales (60%)
5 3592 bp 67.37 13.25 84.02
sw_9_scaffold_2422
Order: Halobacteriales (90.91%)
11 6233 bp 65.91 12.18 83.89
sw_9_scaffold_4365
Genus: Haloarcula (50%)
6 4741 bp 66.40 10.21 82.83
sw_9_scaffold_1354
Order: Halobacteriales (60%)
15 15487 bp 66.55 12.13 82.66
sw_9_scaffold_9900
Order: Halobacteriales (60%)
10 4999 bp 65.79 11.72 82.16
sw_9_scaffold_9979
Order: Halobacteriales (66.67%)
6 5079 bp 66.04 14.96 81.98
sw_9_scaffold_1197
Order: Halobacteriales (64.29%)
14 15527 bp 67.08 12.98 81.81
sw_9_scaffold_6073
Order: Halobacteriales (83.33%)
6 4167 bp 66.45 11.64 81.79
sw_9_scaffold_6016
Species: Haloarcula californiae (60%)
5 4081 bp 64.64 8.92 81.74
sw_9_scaffold_1253
Order: Halobacteriales (60%)
10 10945 bp 65.34 12.67 81.71
sw_9_scaffold_2334
Order: Halobacteriales (84.62%)
13 10019 bp 65.88 11.25 81.15
sw_9_scaffold_8534
Genus: Haloarcula (50%)
6 4796 bp 67.60 14.10 81.07
sw_9_scaffold_3436
Order: Halobacteriales (50%)
8 4978 bp 66.35 10.91 80.82
sw_9_scaffold_6651
Order: Halobacteriales (71.43%)
7 5370 bp 65.53 10.88 80.73
Displaying items 1-50 of 92 in total

Ribosomal proteins shown here were identified using keyword searches of all annotations.

The SCGs are found by conducting USEARCH with a custom database.

The SCGs are found by conducting USEARCH with a custom database.