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SW_9_Halobacteriales_69_20

In projects: SW_9  |  diaphorachaeota  |  archaea_ggkbase

Consensus taxonomy: Halobacteriales  →  Halobacteria  →  Euryarchaeota  →  Archaea

Taxonomy override: Euryarchaeota

Metagenomic Context

Parent: SW_9_UNK

Properties

Avg. coverage: 19.55 Longest contig: 10.33 Kbp Bin length: 424.95 Kbp GC content: 69.45 %
Contigs count: 91 Features count: 547 rRNAs count: 0 tRNAs count: 5

Genome completeness

partial RP 21 / 55 MC: 3 BSCG 14 / 51 MC: 1 ASCG 13 / 38
Displaying items 1-50 of 91 in total
contig # features sequence size GC content (%) Cov Coding Density (%)
sw_9_scaffold_3700
Order: Halobacteriales (50%)
12 9457 bp 72.07 23.99 96.88
sw_9_scaffold_1463
Order: Halobacteriales (90.91%)
11 5646 bp 67.46 15.67 100.21
sw_9_scaffold_3952
Order: Halobacteriales (50%)
10 8700 bp 67.89 21.09 78.00
sw_9_scaffold_1170
Order: Halobacteriales (50%)
10 6789 bp 70.14 20.08 90.76
sw_9_scaffold_4294
Order: Halobacteriales (80%)
10 3161 bp 67.42 22.02 98.99
sw_9_scaffold_2630
Order: Halobacteriales (77.78%)
9 7879 bp 69.68 22.25 92.45
sw_9_scaffold_2011
Order: Halobacteriales (88.89%)
9 7059 bp 70.73 19.92 85.13
sw_9_scaffold_9414
Order: Halobacteriales (77.78%)
9 4483 bp 67.97 19.05 73.88
sw_9_scaffold_5962
Order: Halobacteriales (77.78%)
9 8172 bp 68.33 20.52 86.89
sw_9_scaffold_6209
Species: Natronomonas pharaonis (55.56%)
9 5324 bp 71.36 18.76 90.78
sw_9_scaffold_1443
Order: Halobacteriales (55.56%)
9 6528 bp 68.28 18.08 81.02
sw_9_scaffold_9467
Order: Halobacteriales (66.67%)
9 3925 bp 71.57 16.97 88.82
sw_9_scaffold_2587
Order: Halobacteriales (77.78%)
9 5569 bp 69.10 17.44 88.72
sw_9_scaffold_3006
Order: Halobacteriales (55.56%)
9 7049 bp 69.39 18.19 88.78
sw_9_scaffold_1657
Order: Halobacteriales (88.89%)
9 7740 bp 70.08 20.87 87.29
sw_9_scaffold_1177
Order: Halobacteriales (62.5%)
8 6699 bp 69.25 17.87 96.37
sw_9_scaffold_5651
Order: Halobacteriales (75%)
8 4208 bp 72.22 20.82 71.58
sw_9_scaffold_1596
Order: Halobacteriales (50%)
8 5808 bp 69.15 18.85 91.37
sw_9_scaffold_5472
Order: Halobacteriales (50%)
8 6501 bp 71.39 18.86 67.37
sw_9_scaffold_1167
Order: Halobacteriales (62.5%)
8 6339 bp 72.33 22.46 92.29
sw_9_scaffold_5138
Order: Halobacteriales (75%)
8 5007 bp 69.64 19.79 91.25
sw_9_scaffold_4454
Order: Halobacteriales (57.14%)
7 3957 bp 71.29 21.48 89.46
sw_9_scaffold_2634
Order: Halobacteriales (71.43%)
7 5091 bp 68.49 15.87 79.91
sw_9_scaffold_1165
Order: Halobacteriales (57.14%)
7 10330 bp 68.89 14.60 95.14
sw_9_scaffold_4731
Order: Halobacteriales (57.14%)
7 4536 bp 70.68 17.77 78.24
sw_9_scaffold_3330
Order: Halobacteriales (57.14%)
7 4748 bp 68.72 17.99 81.57
sw_9_scaffold_4934
Order: Halobacteriales (71.43%)
7 5914 bp 70.85 21.53 67.47
sw_9_scaffold_6264
Order: Halobacteriales (85.71%)
7 6299 bp 69.79 24.75 85.73
sw_9_scaffold_3360
Order: Halobacteriales (85.71%)
7 5873 bp 68.69 19.04 86.74
sw_9_scaffold_5397
Order: Halobacteriales (100%)
7 4099 bp 71.38 23.40 81.82
sw_9_scaffold_7465
Order: Halobacteriales (71.43%)
7 4659 bp 70.72 21.85 77.66
sw_9_scaffold_10372
Order: Halobacteriales (50%)
6 3485 bp 69.35 23.36 86.94
sw_9_scaffold_3262
Genus: Natronomonas (50%)
6 3169 bp 70.50 17.36 92.87
sw_9_scaffold_3875
Order: Halobacteriales (50%)
6 5106 bp 67.14 19.35 81.26
sw_9_scaffold_6816
Order: Halobacteriales (66.67%)
6 4072 bp 70.80 19.55 71.91
sw_9_scaffold_6127
Order: Halobacteriales (50%)
6 5765 bp 69.78 21.47 81.96
sw_9_scaffold_7742
Order: Halobacteriales (50%)
6 4349 bp 66.18 18.88 80.98
sw_9_scaffold_9589
Order: Halobacteriales (83.33%)
6 3960 bp 70.98 22.98 88.94
sw_9_scaffold_1757
Order: Halobacteriales (66.67%)
6 4474 bp 66.47 16.38 78.52
sw_9_scaffold_3187
Genus: Natronomonas (50%)
6 3214 bp 68.42 14.93 70.01
sw_9_scaffold_3192
Genus: Natronomonas (50%)
6 4863 bp 69.83 19.08 92.47
sw_9_scaffold_4220
Order: Halobacteriales (50%)
6 3426 bp 70.05 19.18 97.37
sw_9_scaffold_2570
Order: Halobacteriales (50%)
6 6275 bp 71.55 18.60 69.77
sw_9_scaffold_2486
Order: Halobacteriales (83.33%)
6 4101 bp 69.64 20.65 88.88
sw_9_scaffold_8758
Order: Halobacteriales (50%)
6 3793 bp 67.73 20.38 70.00
sw_9_scaffold_2585
Order: Halobacteriales (50%)
6 4697 bp 70.85 21.06 79.71
sw_9_scaffold_7167
Order: Halobacteriales (66.67%)
6 3175 bp 69.35 24.54 92.13
sw_9_scaffold_5585
Order: Halobacteriales (66.67%)
6 4318 bp 71.33 21.47 97.20
sw_9_scaffold_2239
Order: Halobacteriales (50%)
6 5301 bp 69.12 17.73 77.82
sw_9_scaffold_3129
Order: Halobacteriales (66.67%)
6 4359 bp 66.09 16.17 91.12
Displaying items 1-50 of 91 in total

Ribosomal proteins shown here were identified using keyword searches of all annotations.

The SCGs are found by conducting USEARCH with a custom database.

The SCGs are found by conducting USEARCH with a custom database.