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sw_9_scaffold_13600_1

Organism: SW_9_Chlorophyta_53_6

partial RP 0 / 55 BSCG 0 / 51 ASCG 2 / 38
Location: comp(173..1378)

Top 3 Functional Annotations

Value Algorithm Source
Predicted protein n=1 Tax=Micromonas sp. (strain RCC299 / NOUM17) RepID=C1FFZ1_MICSR similarity UNIREF
DB: UNIREF100
  • Identity: 57.2
  • Coverage: 292.0
  • Bit_score: 332
  • Evalue 4.30e-88
U4/U6 small nuclear ribonucleoprotein PRP31 {ECO:0000313|EMBL:JAC69735.1}; Flags: Fragment;; TaxID=582737 species="Eukaryota; Viridiplantae; Chlorophyta; Chlorodendrophyceae; Chlorodendrales; Chlorode similarity UNIPROT
DB: UniProtKB
  • Identity: 56.4
  • Coverage: 291.0
  • Bit_score: 334
  • Evalue 2.70e-88
SIK1; protein implicated in ribosomal biogenesis, Nop56p-like protein similarity KEGG
DB: KEGG
  • Identity: 29.3
  • Coverage: 280.0
  • Bit_score: 108
  • Evalue 4.90e-21

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Taxonomy

Tetraselmis sp. GSL018 → Tetraselmis → Chlorodendrales → Chlorodendrophyceae → Chlorophyta → Viridiplantae

Sequences

DNA sequence
Length: 1206
TCTGAGCTCTCCGATGTGCACAATTTCCTCAAAGACCGCTACCGCCGCAAGTTCCCTGAGCTCGAGTCGCTCGTGCAACATTCCGTCGATTACGCCCGTGTCGTCAAGGCCATCGGCAACCAGACCGACCTCACCCAGGTCAACCTCGATGGCGTCCTTCCCAGCGCCACCATCATGGTCGTCACCGTCACTGGCAGCACTTCCACTGGCACCCAGCTTTCCGCCGACGAGCTCGACCGCTGCTTGCGCGCTTGCGACCTTGCACTTGAACTTAACGATGCCAAATGCAAGCTCCTCCGCTTTATCGAGGCGCAGATGGCCCGCGTTGCGCCCAACCTCTGCGCCATAACTGGATCCGAGATTGCTGCCAAGCTCATGGCCACCGCCGGTGGGCTTCATGCGCTCGCGAAGACCCCCGGATGCAACATCCAGGTGATCGGTGTGAAGAGGAAGCACCTCGCCGGCTTCTCCACGCAATCAGCACAGCAGAGCGGTAACTTGCACGCTGGCTATCTATTTAATACTCAGCTCATTCAGCATGAGACTCCGCCAGCACTTCGCAAAGCTGCGCTTCGTATGATGGCCGGCAAAGTTGCTCTCATGGCTCGCAAGGACGCGTTTGGACACGACCCTCAAGGCTCAACCGGACAGCAGCTAAAGCAAGAGATGTGTAATAAAATCGAAAAGTGGCAAGAGCCAGCACCTGCTCGTATTGTGCAACCGATGAAGAAACCTGAGGACAACAATCGCACGCGTCGAGGCGGCAAGCGCAAACGCAAGCAAAAAGACATGCTGGAGATGACAGAGGTGCGCAAACAGGCAAACCGGGTCGGATTCAACCAACCTGAGGAGGACATCGGCCAAGAAGAAGGTACAATGGATTTTGATTGTCCCTTCCAATTGTTTAGAGCCTGCTTGTTTGGTGAGAGCGTGTCCTTGTCTTGCTCCACGTTGCATCGCAGTTGGCGAGGGCATGGGTCAACTCGGAAGCGGCGGTGGTATATCAGGACGTGTCCGAGCGCCAGCACAAAAAAGCAAAGCGTTACAGCGAGCTTCGAAGCACAGTCAGCAGCGACGCAATATTACTGGCAACCAGAACAGCGGCGCATCTCAGAGTGGCACAGCGTCGAGCCTTTCCTTTACTCCTGCACAGGGCATCGAACTCGCGGACCCGAACTCAAAGGCTCCATCCCTCGGGACCGGTGA
PROTEIN sequence
Length: 402
SELSDVHNFLKDRYRRKFPELESLVQHSVDYARVVKAIGNQTDLTQVNLDGVLPSATIMVVTVTGSTSTGTQLSADELDRCLRACDLALELNDAKCKLLRFIEAQMARVAPNLCAITGSEIAAKLMATAGGLHALAKTPGCNIQVIGVKRKHLAGFSTQSAQQSGNLHAGYLFNTQLIQHETPPALRKAALRMMAGKVALMARKDAFGHDPQGSTGQQLKQEMCNKIEKWQEPAPARIVQPMKKPEDNNRTRRGGKRKRKQKDMLEMTEVRKQANRVGFNQPEEDIGQEEGTMDFDCPFQLFRACLFGESVSLSCSTLHRSWRGHGSTRKRRWYIRTCPSASTKKQSVTASFEAQSAATQYYWQPEQRRISEWHSVEPFLYSCTGHRTRGPELKGSIPRDR*