ggKbase home page

S_p1_S3_coassembly_Thaumarchaeota_33_100

S_p1_S3_coassembly_Candidatus_Nitrosoarchaeum_33_120
In projects: S_p1_S3_coassembly  |  genasci-metabolism  |  all_nc_groundwater_genomes  |  archaea_ggkbase

Consensus taxonomy: Candidatus Nitrosoarchaeum  →  Nitrosopumilales  →  Thaumarchaeota  →  Archaea

Description

GD17-1_Sp1_coassembly_CONCOCT_175 RK

Displaying items 1-50 of 174 in total
contig # features sequence size GC content (%) Cov Coding Density (%)
S_p1_S3_coassembly_k141_2064886
Species: Candidatus Nitrosoarchaeum limnia (100%)
5 2852 bp 35.83 129.44 100.98
S_p1_S3_coassembly_k141_2326133
Species: Candidatus Nitrosoarchaeum limnia (100%)
2 2573 bp 34.24 140.67 100.51
S_p1_S3_coassembly_k141_582384
Species: Candidatus Nitrosoarchaeum koreensis (100%)
5 3918 bp 30.65 85.34 100.15
S_p1_S3_coassembly_k141_2450564
Species: Candidatus Nitrosoarchaeum limnia (50%)
2 3592 bp 36.30 145.49 99.97
S_p1_S3_coassembly_k141_1775463
Species: Candidatus Nitrosoarchaeum koreensis (85.71%)
7 4443 bp 30.59 104.25 99.87
S_p1_S3_coassembly_k141_148584
Species: Candidatus Nitrosoarchaeum limnia (50%)
2 2655 bp 34.88 135.25 99.66
S_p1_S3_coassembly_k141_1956525
Species: Candidatus Nitrosoarchaeum koreensis (66.67%)
3 4102 bp 35.54 137.02 99.39
S_p1_S3_coassembly_k141_1080342
Species: Candidatus Nitrosoarchaeum koreensis (50%)
2 2719 bp 35.23 114.80 99.19
S_p1_S3_coassembly_k141_26440
Species: Candidatus Nitrosoarchaeum limnia (60%)
5 5032 bp 32.93 114.23 98.85
S_p1_S3_coassembly_k141_1205737
Species: Candidatus Nitrosoarchaeum koreensis (66.67%)
6 4909 bp 32.78 104.17 98.82
S_p1_S3_coassembly_k141_2182125
Species: Candidatus Nitrosoarchaeum limnia (100%)
3 3035 bp 33.97 109.47 98.45
S_p1_S3_coassembly_k141_37265
Species: Candidatus Nitrosoarchaeum limnia (71.43%)
7 5550 bp 33.55 119.62 98.43
S_p1_S3_coassembly_k141_1259213
Species: Candidatus Nitrosoarchaeum koreensis (57.14%)
7 7039 bp 35.03 142.71 98.32
S_p1_S3_coassembly_k141_925710
Species: Candidatus Nitrosoarchaeum limnia (100%)
2 2528 bp 35.01 135.76 98.26
S_p1_S3_coassembly_k141_549748
Species: Candidatus Nitrosoarchaeum limnia (75%)
4 4509 bp 32.40 120.26 98.14
S_p1_S3_coassembly_k141_942473
Species: Candidatus Nitrosoarchaeum limnia (72.73%)
11 8288 bp 35.35 151.59 98.02
S_p1_S3_coassembly_k141_1676640
Species: Candidatus Nitrosoarchaeum limnia (75%)
4 2632 bp 32.18 86.68 97.91
S_p1_S3_coassembly_k141_1887009
Species: Candidatus Nitrosoarchaeum koreensis (100%)
3 3330 bp 33.33 120.14 97.75
S_p1_S3_coassembly_k141_1321626
Species: Candidatus Nitrosoarchaeum limnia (75%)
4 4094 bp 34.42 139.30 97.53
S_p1_S3_coassembly_k141_1930049
Species: Candidatus Nitrosoarchaeum limnia (60%)
5 2891 bp 31.96 108.02 97.44
S_p1_S3_coassembly_k141_1127849
Species: Candidatus Nitrosoarchaeum limnia (60%)
5 3535 bp 31.34 98.91 97.43
S_p1_S3_coassembly_k141_498048
Species: Candidatus Nitrosoarchaeum koreensis (50%)
12 6153 bp 33.92 126.94 97.37
S_p1_S3_coassembly_k141_341531
Species: Candidatus Nitrosoarchaeum koreensis (60%)
5 4272 bp 35.30 124.61 97.33
S_p1_S3_coassembly_k141_1650237
Species: Candidatus Nitrosoarchaeum limnia (100%)
2 3114 bp 35.10 152.26 96.72
S_p1_S3_coassembly_k141_1520504
Species: Candidatus Nitrosoarchaeum limnia (57.14%)
7 5842 bp 32.63 132.00 96.44
S_p1_S3_coassembly_k141_670274
Species: Candidatus Nitrosoarchaeum limnia (50%)
6 5821 bp 34.44 130.52 96.27
S_p1_S3_coassembly_k141_2109155
Genus: Candidatus Nitrosoarchaeum (81.82%)
11 9801 bp 33.54 152.31 96.17
S_p1_S3_coassembly_k141_1829645
Species: Candidatus Nitrosoarchaeum limnia (83.33%)
6 2764 bp 34.19 139.25 96.17
S_p1_S3_coassembly_k141_1206627
Genus: Candidatus Nitrosoarchaeum (85.71%)
7 4465 bp 34.09 140.29 96.08
S_p1_S3_coassembly_k141_2323612
Species: Candidatus Nitrosoarchaeum koreensis (100%)
5 4918 bp 30.83 93.48 96.08
S_p1_S3_coassembly_k141_1389685
Species: Candidatus Nitrosoarchaeum koreensis (80%)
5 3059 bp 34.59 107.04 96.01
S_p1_S3_coassembly_k141_2188145
Species: Candidatus Nitrosoarchaeum limnia (100%)
3 2503 bp 33.24 127.05 96.00
S_p1_S3_coassembly_k141_1855678
Genus: Candidatus Nitrosoarchaeum (90.91%)
11 8695 bp 33.93 138.63 95.95
S_p1_S3_coassembly_k141_564443
Genus: Candidatus Nitrosoarchaeum (71.43%)
7 6255 bp 31.13 102.25 95.88
S_p1_S3_coassembly_k141_2460961
Species: Candidatus Nitrosoarchaeum koreensis (100%)
3 3178 bp 33.13 132.82 95.72
S_p1_S3_coassembly_k141_1501271
Species: Candidatus Nitrosoarchaeum limnia (75%)
4 3132 bp 33.49 147.80 95.69
S_p1_S3_coassembly_k141_1826696
Species: Candidatus Nitrosoarchaeum koreensis (75%)
4 3394 bp 31.17 93.52 95.64
S_p1_S3_coassembly_k141_1100277
Species: Candidatus Nitrosoarchaeum koreensis (100%)
7 6021 bp 32.62 111.19 95.62
S_p1_S3_coassembly_k141_638156
Species: Candidatus Nitrosoarchaeum limnia (50%)
22 19134 bp 32.23 129.32 95.43
S_p1_S3_coassembly_k141_484472
Species: Candidatus Nitrosoarchaeum limnia (75%)
4 2695 bp 31.06 110.98 95.40
S_p1_S3_coassembly_k141_917577
Species: Candidatus Nitrosoarchaeum koreensis (81.82%)
11 7625 bp 31.82 94.92 95.37
S_p1_S3_coassembly_k141_1712971
Species: Candidatus Nitrosoarchaeum limnia (66.67%)
24 13962 bp 34.05 148.54 95.29
S_p1_S3_coassembly_k141_70194
Species: Candidatus Nitrosoarchaeum koreensis (100%)
2 2799 bp 35.91 147.53 95.18
S_p1_S3_coassembly_k141_1333302
Species: Candidatus Nitrosoarchaeum limnia (66.67%)
6 4421 bp 30.69 94.09 95.14
S_p1_S3_coassembly_k141_1881553
Genus: Candidatus Nitrosoarchaeum (85.71%)
7 7297 bp 34.70 135.88 95.14
S_p1_S3_coassembly_k141_2002597
Species: Candidatus Nitrosoarchaeum koreensis (100%)
6 5899 bp 32.12 84.73 95.05
S_p1_S3_coassembly_k141_294604
Species: Candidatus Nitrosoarchaeum limnia (66.67%)
9 6394 bp 32.91 126.14 95.04
S_p1_S3_coassembly_k141_982314
Species: Candidatus Nitrosoarchaeum limnia (75%)
4 2784 bp 32.97 92.94 94.83
S_p1_S3_coassembly_k141_787270
Species: Candidatus Nitrosoarchaeum koreensis (60%)
5 3562 bp 31.44 104.35 94.75
S_p1_S3_coassembly_k141_915735
Species: Candidatus Nitrosoarchaeum koreensis (66.67%)
3 4224 bp 33.26 136.22 94.67
Displaying items 1-50 of 174 in total

Ribosomal proteins shown here were identified using keyword searches of all annotations.

The SCGs are found by conducting USEARCH with a custom database.

The SCGs are found by conducting USEARCH with a custom database.