ggKbase home page

scnpilot_cont_500_p_scaffold_55_74

Organism: SCNPILOT_CONT_500_P_TM7_47_87

near complete RP 47 / 55 MC: 1 BSCG 48 / 51 ASCG 11 / 38 MC: 2
Location: 74380..75420

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase sigma factor RpoD id=4041682 bin=GWC2_TM7_44_17 species=RAAC3_TM7 genus=RAAC3_TM7 taxon_order=RAAC3_TM7 taxon_class=RAAC3_TM7 phylum=TM7 tax=GWC2_TM7_44_17 organism_group=TM7 organism_desc=Genome has competed version similarity UNIREF
DB: UNIREF100
  • Identity: 84.8
  • Coverage: 335.0
  • Bit_score: 544
  • Evalue 8.20e-152
  • rbh
sigA; RNA polymerase major sigma-43 factor (sigma-A) Tax=GWC2_TM7_44_17_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 83.4
  • Coverage: 337.0
  • Bit_score: 544
  • Evalue 1.10e-151
sigA; RNA polymerase major sigma-43 factor (sigma-A) similarity KEGG
DB: KEGG
  • Identity: 86.1
  • Coverage: 323.0
  • Bit_score: 542
  • Evalue 6.70e-152

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

GWC2_TM7_44_17_curated → Candidatus Saccharibacteria → Bacteria

Sequences

DNA sequence
Length: 1041
GTGCCAAAAGGTAAGAAAAAAGACGAAGAAATTATTGAAGAAGATGTCATTATCGATGACATTGCTGGTGATGATACTGTAGCGGATATTGTCGATGTACCGCTTCCAGCTGTTGAATTTGACGGCCCTGCACTGGAAGATCTTGATGACGAAGATATTGATACCGACGAAGACCTTCTTAGCCAAGAACAGTACTTTGATGATGCTAGTGACGACAGTGTACGCCTATACCTCCGCGAGATCGGTAAAATCCCACTCTTGAACGCCGAAGAAGAACTAGAACTTGCGCAACGAGTTGTAAATGGTGATAAAAAAGCCAAGGACAAAATGGCCGAAGCAAACATGCGTTTGGTAGTCTCGATTGCCAAGCGCTACAGTGGCCGTGGTCTTGATTTTCTTGACCTTATTCAAGAAGGCAATACCGGTTTGCTGCGCGCGGTTGAAAAGTTCGACCCAGACAAGGGCTTTAAGTTTTCAACCTACGCGACTTGGTGGATTCGTCAGGCCATTACACGTGCTATTGCCGACCAAGCCCGTACTATTCGTATTCCAGTACACATGGTGGAAACCATTAACAAGCTGCTCCGTACCCAGCGCCGTATGACCCAAGAGCTCAACCGCGAGCCTACCATTGAAGAGCTTGCCAAAGAACTCGAAATGGAACCTGAAAAGGTTGAATACGTCATGAAGATTAAGCAGGATATTACCTCACTTGATGCTGGTGTTGGCCGCGATGGCGATGACGAGGACTCAGTTCTCCGTGACTTTATTGAAGATGAAGATAGTGCCACCCCTGAAGAATCTGCTGCGTCGCAACTTTTGAAAGAACAAGTTCAAGAGATCTTGTCGACTCTTTCAGACCGCGAACAAAAAATCATTCGTATGCGCTTCGGCCTTGATAACGGCAAAAGCCATACCCTTGAAGAAGTAGGGCAGGAATTTGCGGTGACCCGTGAGCGTATTCGCCAAATTGAAGCGAAAGCACTGGCGAAACTTCGTAAACACAAAGATTCAAAGAAACTTCACGATTACTTGTCTTAA
PROTEIN sequence
Length: 347
VPKGKKKDEEIIEEDVIIDDIAGDDTVADIVDVPLPAVEFDGPALEDLDDEDIDTDEDLLSQEQYFDDASDDSVRLYLREIGKIPLLNAEEELELAQRVVNGDKKAKDKMAEANMRLVVSIAKRYSGRGLDFLDLIQEGNTGLLRAVEKFDPDKGFKFSTYATWWIRQAITRAIADQARTIRIPVHMVETINKLLRTQRRMTQELNREPTIEELAKELEMEPEKVEYVMKIKQDITSLDAGVGRDGDDEDSVLRDFIEDEDSATPEESAASQLLKEQVQEILSTLSDREQKIIRMRFGLDNGKSHTLEEVGQEFAVTRERIRQIEAKALAKLRKHKDSKKLHDYLS*