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SCNpilot_expt_300_bf_scaffold_17

Search features with annotation key words

Displaying items 31-60 of 309 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_expt_300_bf_scaffold_17_31
RIFOXYD1_FULL_OD1_44_32_curated, Parcubacteria, Bacteria

Not on your lists

35270..35953
DNA (684bp) protein (228aa)
MutT/nudix family protein; K03574 7,8-dihydro-8-oxoguanine triphosphatase [EC:3.6.1.-] Tax=RIFOXYD1_FULL_OD1_44_32_curated
NUDIX hydrolase (Fragment) n=1 Tax=uncultured bacterium RepID=K2DCY8_9BACT
NUDIX hydrolase
SCNpilot_expt_300_bf_scaffold_17_32
GWC2_TM7_44_17_curated, Candidatus Saccharibacteria, Bacteria

Not on your lists

comp(35948..37918)
DNA (1971bp) protein (657aa)
UvrABC system protein B id=2441922 bin=GWC2_TM7_44_17 species=RAAC3_TM7 genus=RAAC3_TM7 taxon_order=RAAC3_TM7 taxon_class=RAAC3_TM7 phylum=TM7 tax=GWC2_TM7_44_17 organism_group=TM7 organism_desc=Genome has competed version rbh
uvrB; excinuclease ABC (subunit B) Tax=GWC2_TM7_44_17_curated
UvrABC system protein B
SCNpilot_expt_300_bf_scaffold_17_33
RHI_Saccharibacteria_42_8, Candidatus Saccharibacteria, Bacteria

Not on your lists

comp(37934..38704)
DNA (771bp) protein (257aa)
hypothetical protein; K06966 Tax=RIFCSPHIGHO2_12_FULL_Saccharibacteria_42_8_curated
Lysine decarboxylase family protein id=4041788 bin=GWC2_TM7_44_17 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Candidatus Saccharibacteria tax=GWC2_TM7_44_17 organism_group=TM7 organism_desc=Genome has competed version
Lysine decarboxylase family protein
SCNpilot_expt_300_bf_scaffold_17_34
Candidatus Saccharimonas aalborgensis, Candidatus Saccharimonas, Candidatus Saccharibacteria, Bacteria

Not on your lists

comp(38708..40186)
DNA (1479bp) protein (493aa)
putative Ribokinase (EC:2.7.1.15)
Putative Ribokinase {ECO:0000313|EMBL:AGL61794.1}; EC=2.7.1.15 {ECO:0000313|EMBL:AGL61794.1};; TaxID=1332188 species="Bacteria; Candidatus Saccharibacteria; Candidatus Saccharimonas.;" source="Candida
Putative Ribokinase n=1 Tax=Candidatus Saccharimonas aalborgensis RepID=R4PLU2_9BACT rbh
SCNpilot_expt_300_bf_scaffold_17_35
RHI_Saccharibacteria_42_8, Candidatus Saccharibacteria, Bacteria

Not on your lists

comp(40195..41160)
DNA (966bp) protein (322aa)
putative Ribokinase (EC:2.7.1.15) Tax=RIFCSPHIGHO2_12_FULL_Saccharibacteria_42_8_curated
putative Ribokinase (EC:2.7.1.15)
PfkB family kinase, partial id=3133849 bin=GWC2_TM7_48_9 species=RAAC3_TM7 genus=RAAC3_TM7 taxon_order=RAAC3_TM7 taxon_class=RAAC3_TM7 phylum=TM7 tax=GWC2_TM7_48_9 organism_group=TM7 organism_desc=Good rbh
SCNpilot_expt_300_bf_scaffold_17_36
Candidatus Saccharibacteria oral taxon TM7x, Candidatus Saccharibacteria, Bacteria

Not on your lists

comp(41164..42075)
DNA (912bp) protein (304aa)
ketose-bisphosphate aldolase
Ketose-bisphosphate aldolase {ECO:0000313|EMBL:AJA06532.1}; TaxID=1476577 species="Bacteria; Candidatus Saccharibacteria.;" source="Candidatus Saccharibacteria oral taxon TM7x.;"
Ketose-bisphosphate aldolase, class-II id=2441943 bin=GWC2_TM7_44_17 species=RAAC3_TM7 genus=RAAC3_TM7 taxon_order=RAAC3_TM7 taxon_class=RAAC3_TM7 phylum=TM7 tax=GWC2_TM7_44_17 organism_group=TM7 organism_desc=Genome has competed version rbh
SCNpilot_expt_300_bf_scaffold_17_37
GWC2_TM7_44_17_curated, Candidatus Saccharibacteria, Bacteria

Not on your lists

comp(42174..43169)
DNA (996bp) protein (332aa)
tktA; transketolase C-terminal domain protein (EC:2.2.1.1) Tax=GWC2_TM7_44_17_curated
Transketolase, central region id=2441950 bin=GWC2_TM7_44_17 species=RAAC3_TM7 genus=RAAC3_TM7 taxon_order=RAAC3_TM7 taxon_class=RAAC3_TM7 phylum=TM7 tax=GWC2_TM7_44_17 organism_group=TM7 organism_desc=Genome has competed version rbh
Transketolase, central region
SCNpilot_expt_300_bf_scaffold_17_38
R_Saccharibacteria_45_15, Candidatus Saccharibacteria, Bacteria

Not on your lists

comp(43166..43963)
DNA (798bp) protein (266aa)
tktB; transketolase N-terminal domain protein (EC:2.2.1.1) Tax=RIFCSPHIGHO2_01_FULL_Saccharibacteria_45_15_curated
Transketolase domain protein id=2441956 bin=GWC2_TM7_44_17 species=RAAC3_TM7 genus=RAAC3_TM7 taxon_order=RAAC3_TM7 taxon_class=RAAC3_TM7 phylum=TM7 tax=GWC2_TM7_44_17 organism_group=TM7 organism_desc=Genome has competed version
Transketolase protein
SCNpilot_expt_300_bf_scaffold_17_39
Candidatus Saccharibacteria bacterium RAAC3_TM7_1, Candidatus Saccharibacteria, Bacteria

Not on your lists

comp(44030..44674)
DNA (645bp) protein (215aa)
Ribulose-phosphate 3-epimerase n=1 Tax=Candidatus Saccharibacteria bacterium RAAC3_TM7_1 RepID=V5RWE0_9BACT
Ribulose-phosphate 3-epimerase
Ribulose-phosphate 3-epimerase {ECO:0000313|EMBL:AHB42703.1}; TaxID=1394711 species="Bacteria; Candidatus Saccharibacteria.;" source="Candidatus Saccharibacteria bacterium RAAC3_TM7_1.;"
SCNpilot_expt_300_bf_scaffold_17_40
Candidatus Saccharibacteria bacterium RAAC3_TM7_1, Candidatus Saccharibacteria, Bacteria

Not on your lists

comp(44671..45126)
DNA (456bp) protein (152aa)
Sugar-phosphate isomerase, RpiB/LacA/LacB family n=1 Tax=Candidatus Saccharibacteria bacterium RAAC3_TM7_1 RepID=V5RYJ7_9BACT
Sugar-phosphate isomerase, RpiB/LacA/LacB family
Sugar-phosphate isomerase, RpiB/LacA/LacB family {ECO:0000313|EMBL:AHB42704.1}; TaxID=1394711 species="Bacteria; Candidatus Saccharibacteria.;" source="Candidatus Saccharibacteria bacterium RAAC3_TM7_
SCNpilot_expt_300_bf_scaffold_17_41
GWC2_TM7_44_17_curated, Candidatus Saccharibacteria, Bacteria

Not on your lists

comp(45149..46201)
DNA (1053bp) protein (351aa)
gap; Glyceraldehyde-3-phosphate dehydrogenase (EC:1.2.1.12) Tax=GWC2_TM7_44_17_curated
Glyceraldehyde-3-phosphate dehydrogenase, type I id=2441972 bin=GWC2_TM7_44_17 species=RAAC3_TM7 genus=RAAC3_TM7 taxon_order=RAAC3_TM7 taxon_class=RAAC3_TM7 phylum=TM7 tax=GWC2_TM7_44_17 organism_group=TM7 organism_desc=Genome has competed version
glyceraldehyde-3-phosphate dehydrogenase
SCNpilot_expt_300_bf_scaffold_17_42
GWC2_TM7_44_17_curated, Candidatus Saccharibacteria, Bacteria

Not on your lists

46662..48221
DNA (1560bp) protein (520aa)
relA; (P)ppGpp synthetase I, SpoT/RelA (EC:2.7.6.5) Tax=GWC2_TM7_44_17_curated
Metal dependent phosphohydrolase id=2441976 bin=GWC2_TM7_44_17 species=RAAC3_TM7 genus=RAAC3_TM7 taxon_order=RAAC3_TM7 taxon_class=RAAC3_TM7 phylum=TM7 tax=GWC2_TM7_44_17 organism_group=TM7 organism_desc=Genome has competed version
Metal dependent phosphohydrolase
SCNpilot_expt_300_bf_scaffold_17_43
R_Saccharibacteria_45_15, Candidatus Saccharibacteria, Bacteria

Not on your lists

comp(48224..48784)
DNA (561bp) protein (187aa)
putative inorganic pyrophosphatase (EC:3.6.1.1); K01507 inorganic pyrophosphatase [EC:3.6.1.1] Tax=RIFCSPHIGHO2_01_FULL_Saccharibacteria_45_15_curated
inorganic pyrophosphatase
Inorganic pyrophosphatase id=2442152 bin=GWC2_TM7_44_17 species=unknown genus=Neisseria taxon_order=Neisseriales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWC2_TM7_44_17 organism_group=TM7 organism_desc=Genome has competed version
SCNpilot_expt_300_bf_scaffold_17_44
BJP_IG2157_Actinomycetales_63_19, Actinomycetales, Actinobacteridae, Actinobacteria, Bacteria

Not on your lists

48864..49862
DNA (999bp) protein (333aa)
cardiolipin synthase 2; K06132 putative cardiolipin synthase [EC:2.7.8.-] id=5226773 bin=RAAC3_TM7 species=RAAC3_TM7 genus=RAAC3_TM7 taxon_order=RAAC3_TM7 taxon_class=RAAC3_TM7 phylum=TM7 tax=RAAC3_TM7 organism_group=TM7
hypothetical protein
Tax=BJP_IG2157_Actinomycetales_63_19
SCNpilot_expt_300_bf_scaffold_17_45
GWC2_TM7_44_17_curated, Candidatus Saccharibacteria, Bacteria

Not on your lists

comp(49859..50800)
DNA (942bp) protein (314aa)
putative thioredoxin reductase (EC:1.8.1.9) Tax=GWC2_TM7_44_17_curated
FAD-dependent pyridine nucleotide-disulphide oxidoreductase id=2442159 bin=GWC2_TM7_44_17 species=RAAC3_TM7 genus=RAAC3_TM7 taxon_order=RAAC3_TM7 taxon_class=RAAC3_TM7 phylum=TM7 tax=GWC2_TM7_44_17 organism_group=TM7 organism_desc=Genome has competed version rbh
FAD-dependent pyridine nucleotide-disulfide oxidoreductase
SCNpilot_expt_300_bf_scaffold_17_46
GWC2_TM7_44_17_curated, Candidatus Saccharibacteria, Bacteria

Not on your lists

comp(50790..51461)
DNA (672bp) protein (224aa)
putative Peptidylprolyl isomerase (EC:5.2.1.8) Tax=GWC2_TM7_44_17_curated
Peptidyl-prolyl cis-trans isomerase id=2442162 bin=GWC2_TM7_44_17 species=RAAC3_TM7 genus=RAAC3_TM7 taxon_order=RAAC3_TM7 taxon_class=RAAC3_TM7 phylum=TM7 tax=GWC2_TM7_44_17 organism_group=TM7 organism_desc=Genome has competed version
peptidylprolyl isomerase
SCNpilot_expt_300_bf_scaffold_17_47
GWC2_TM7_44_17_curated, Candidatus Saccharibacteria, Bacteria

Not on your lists

comp(51463..53940)
DNA (2478bp) protein (826aa)
pheT; Phenylalanine--tRNA ligase beta subunit (EC:6.1.1.20) Tax=GWC2_TM7_44_17_curated
Phenylalanine--tRNA ligase beta subunit id=2442170 bin=GWC2_TM7_44_17 species=candidate division TM7 genomosp. GTL1 genus=unknown taxon_order=unknown taxon_class=unknown phylum=Candidatus Saccharibacteria tax=GWC2_TM7_44_17 organism_group=TM7 organism_desc=Genome has competed version rbh
Phenylalanine-tRNA ligase beta subunit
SCNpilot_expt_300_bf_scaffold_17_48
CG_TM7_01, Candidatus Saccharibacteria, Bacteria

Not on your lists


comp(53937..54953)
DNA (1017bp) protein (339aa)
pheS; Phenylalanine--tRNA ligase alpha subunit (EC:6.1.1.20) Tax=CG_TM7_01
pheS; phenylalanine--tRNA ligase (EC:6.1.1.20)
Phenylalanine--tRNA ligase id=2442173 bin=GWC2_TM7_44_17 species=candidate division TM7 genomosp. GTL1 genus=unknown taxon_order=unknown taxon_class=unknown phylum=Candidatus Saccharibacteria tax=GWC2_TM7_44_17 organism_group=TM7 organism_desc=Genome has competed version rbh
SCNpilot_expt_300_bf_scaffold_17_49
BJP_IG2103_TM7_39_1400, Candidatus Saccharibacteria, Bacteria

Not on your lists

comp(55001..55240)
DNA (240bp) protein (80aa)
hypothetical protein
coiled-coil id=5226784 bin=RAAC3_TM7 species=RAAC3_TM7 genus=RAAC3_TM7 taxon_order=RAAC3_TM7 taxon_class=RAAC3_TM7 phylum=TM7 tax=RAAC3_TM7 organism_group=TM7
Tax=BJP_IG2103_TM7_39_1400
SCNpilot_expt_300_bf_scaffold_17_50
GWC2_TM7_44_17_curated, Candidatus Saccharibacteria, Bacteria

Not on your lists

55321..56163
DNA (843bp) protein (281aa)
Major intrinsic protein id=2442178 bin=GWC2_TM7_44_17 species=RAAC3_TM7 genus=RAAC3_TM7 taxon_order=RAAC3_TM7 taxon_class=RAAC3_TM7 phylum=TM7 tax=GWC2_TM7_44_17 organism_group=TM7 organism_desc=Genome has competed version
membrane protein of unknown function Tax=GWC2_TM7_44_17_curated
major intrinsic protein
SCNpilot_expt_300_bf_scaffold_17_51
GWA1_OP11_40_9_partial, Curtissbacteria, Microgenomates, Bacteria

Not on your lists

comp(56209..56409)
DNA (201bp) protein (67aa)
Putative uncharacterized protein Tax=GWA1_OP11_40_9_partial
SCNpilot_expt_300_bf_scaffold_17_52
unknown

Not on your lists

comp(56406..56654)
DNA (249bp) protein (83aa)

This feature has no annotations

SCNpilot_expt_300_bf_scaffold_17_53
BJP_IG2103_TM7_39_1400, Candidatus Saccharibacteria, Bacteria

Not on your lists

comp(56657..57736)
DNA (1080bp) protein (360aa)
hypothetical protein
Putative DNA recombination protein id=2442181 bin=GWC2_TM7_44_17 species=RAAC3_TM7 genus=RAAC3_TM7 taxon_order=RAAC3_TM7 taxon_class=RAAC3_TM7 phylum=TM7 tax=GWC2_TM7_44_17 organism_group=TM7 organism_desc=Genome has competed version
Tax=BJP_IG2103_TM7_39_1400
SCNpilot_expt_300_bf_scaffold_17_54
GWC2_TM7_44_17_curated, Candidatus Saccharibacteria, Bacteria

Not on your lists

comp(57753..58235)
DNA (483bp) protein (161aa)
membrane protein of unknown function Tax=GWC2_TM7_44_17_curated
id=3133647 bin=GWC2_TM7_48_9 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC2_TM7_48_9 organism_group=TM7 organism_desc=Good
hypothetical protein
SCNpilot_expt_300_bf_scaffold_17_55
BJP_IG2103_TM7_39_1400, Candidatus Saccharibacteria, Bacteria

Not on your lists

comp(58207..58716)
DNA (510bp) protein (170aa)
Phosphoesterase, PA-phosphatase related protein id=2442185 bin=GWC2_TM7_44_17 species=RAAC3_TM7 genus=RAAC3_TM7 taxon_order=RAAC3_TM7 taxon_class=RAAC3_TM7 phylum=TM7 tax=GWC2_TM7_44_17 organism_group=TM7 organism_desc=Genome has competed version
Phosphoesterase, PA-phosphatase related protein
Tax=BJP_IG2103_TM7_39_1400
SCNpilot_expt_300_bf_scaffold_17_56
R_OP11_Gottesmanbacteria_39_12, Gottesmanbacteria, Microgenomates, Bacteria

Not on your lists

58870..59559
DNA (690bp) protein (230aa)
Putative Two-component transcriptional regulator; putative transcriptional regulator involved in heavy-metal (Cu/Zn) homeostasis n=1 Tax=NC10 bacterium 'Dutch sediment' RepID=D5MLP3_9BACT id=23001 bin=ACD22 species=Candidatus Methylomirabilis oxyfera genus=Candidatus Methylomirabilis taxon_order=unknown taxon_class=unknown phylum=unknown tax=ACD22 organism_group=WWE3 organism_desc=WWE3
transcriptional activator protein CopR; K07665 two-component system, OmpR family, copper resistance phosphate regulon response regulator CusR Tax=RIFCSPLOWO2_01_FULL_OP11_Gottesmanbacteria_39_12_curat
transcriptional regulator
SCNpilot_expt_300_bf_scaffold_17_57
R_OP11_Roizmanbacteria_38_11, Roizmannbacteria, Microgenomates, Bacteria

Not on your lists

59569..60927
DNA (1359bp) protein (453aa)
integral membrane sensor signal transduction histidine kinase Tax=RIFCSPLOWO2_01_FULL_OP11_Roizmanbacteria_38_11_curated
PAS/PAC sensor signal transduction histidine kinase id=5099440 bin=WS6_GWF2_39_15 species=WS6_CLOSED genus=WS6_CLOSED taxon_order=WS6_CLOSED taxon_class=WS6_CLOSED phylum=WS6 tax=WS6_GWF2_39_15 organism_group=WS6 (Doikabacteria) organism_desc=replace with complete version
integral membrane sensor signal transduction histidine kinase
SCNpilot_expt_300_bf_scaffold_17_58
Candidatus Saccharibacteria oral taxon TM7x, Candidatus Saccharibacteria, Bacteria

Not on your lists

comp(60908..61729)
DNA (822bp) protein (274aa)
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AJA06816.1}; TaxID=1476577 species="Bacteria; Candidatus Saccharibacteria.;" source="Candidatus Saccharibacteria oral taxon TM7x.;"
hydrolase, partial id=2440904 bin=GWC2_TM7_44_17 species=candidate division TM7 single-cell isolate TM7c genus=unknown taxon_order=unknown taxon_class=unknown phylum=Candidatus Saccharibacteria tax=GWC2_TM7_44_17 organism_group=TM7 organism_desc=Genome has competed version
SCNpilot_expt_300_bf_scaffold_17_59
CG_TM7_01, Candidatus Saccharibacteria, Bacteria

Not on your lists

comp(61957..62505)
DNA (549bp) protein (183aa)
id=2442424 Tax=CG_TM7_01
id=2442424 bin=GWC2_TM7_44_17 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC2_TM7_44_17 organism_group=TM7 organism_desc=Genome has competed version
SCNpilot_expt_300_bf_scaffold_17_60
CG_TM7_01, Candidatus Saccharibacteria, Bacteria

Not on your lists

comp(62548..63036)
DNA (489bp) protein (163aa)
membrane protein of unknown function Tax=CG_TM7_01
id=2442425 bin=GWC2_TM7_44_17 species=RAAC3_TM7 genus=RAAC3_TM7 taxon_order=RAAC3_TM7 taxon_class=RAAC3_TM7 phylum=TM7 tax=GWC2_TM7_44_17 organism_group=TM7 organism_desc=Genome has competed version
Displaying items 31-60 of 309 in total

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