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SCNpilot_cont_500_bf_scaffold_6227_7

Organism: SCNpilot_BF_INOC_TM7_49_20

near complete RP 48 / 55 MC: 1 BSCG 48 / 51 MC: 1 ASCG 11 / 38 MC: 2
Location: comp(6014..6388)

Top 3 Functional Annotations

Value Algorithm Source
polyprenyl synthase / dimethylallyltranstransferase; K13787 geranylgeranyl diphosphate synthase, type I [EC:2.5.1.1 2.5.1.10 2.5.1.29] similarity KEGG
DB: KEGG
  • Identity: 36.9
  • Coverage: 122.0
  • Bit_score: 84
  • Evalue 3.40e-14
Geranylgeranyl pyrophosphate synthase id=3133195 bin=GWC2_TM7_48_9 species=Clavibacter michiganensis genus=Clavibacter taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria tax=GWC2_TM7_48_9 organism_group=TM7 organism_desc=Good similarity UNIREF
DB: UNIREF100
  • Identity: 40.3
  • Coverage: 124.0
  • Bit_score: 93
  • Evalue 1.80e-16
Tax=RIFCSPHIGHO2_01_FULL_Saccharibacteria_45_15_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 44.8
  • Coverage: 125.0
  • Bit_score: 95
  • Evalue 5.10e-17

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Taxonomy

R_Saccharibacteria_45_15 → Candidatus Saccharibacteria → Bacteria

Sequences

DNA sequence
Length: 375
TACCTCGGCATTGCGTATCAACTGCAAGACGATCTACTTGGTGTATTCGGAGACGAGCAAAAGACGGGCAAGAGTACCGTGAGTGATATCCGTGAAGGTAAGAGAACTTTCATGATTCAGGAATTCGAACGTCTCGCAGACAGCGACGCACAGTCTGAATTTTTTGCGATATTTCACCGTGAAGATGCGAGCGATGCAGAACTTAGTCGCGCTCGCACCCTGCTAGACGAATCGGGTGCGAAACAAGCCACGGAATCGAGAATCGCATTTTATACCAATGAATGCGAGACACTCCTTGCAAGCCTTTCACTCGAAGAAGGACGACGGGGTGTATTTTATGAACTAATCCAAACCTGTGTAGTCCGAGAATCATAG
PROTEIN sequence
Length: 125
YLGIAYQLQDDLLGVFGDEQKTGKSTVSDIREGKRTFMIQEFERLADSDAQSEFFAIFHREDASDAELSRARTLLDESGAKQATESRIAFYTNECETLLASLSLEEGRRGVFYELIQTCVVRES*