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SCNpilot_cont_750_bf_scaffold_2225_14

Organism: SCNPILOT_CONT_500_P_TM7_47_87

near complete RP 46 / 55 MC: 1 BSCG 46 / 51 MC: 4 ASCG 10 / 38 MC: 4
Location: comp(11908..12252)

Top 3 Functional Annotations

Value Algorithm Source
Transcriptional regulator, HxlR family n=1 Tax=Runella slithyformis (strain ATCC 29530 / DSM 19594 / LMG 11500 / NCIMB 11436 / LSU 4) RepID=F8ED63_RUNSL similarity UNIREF
DB: UNIREF100
  • Identity: 43.6
  • Coverage: 94.0
  • Bit_score: 87
  • Evalue 6.90e-15
HxlR family transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 43.6
  • Coverage: 94.0
  • Bit_score: 87
  • Evalue 2.20e-15
Transcriptional regulator, HxlR family {ECO:0000313|EMBL:AEI46711.1}; TaxID=761193 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Runella.;" source="Runella slithyformis (strain ATCC 29530 / DSM 19594 / LMG 11500 /; NCIMB 11436 / LSU 4).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 43.6
  • Coverage: 94.0
  • Bit_score: 87
  • Evalue 9.80e-15

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Taxonomy

Runella slithyformis → Runella → Cytophagales → Cytophagia → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 345
ATGCCTGATGATCGTCGCTCTCTGCGCCTAGTCGCCACTACCCTTGCTGGTAAGTGGACTCTCCCGGTTGTTTATTCACTTAAAGACAATACTCGTCGCTATCATGAAATCCGTCGCCATTTTCCAAAGGCGACCGAGAAAATGATTATCGCTACACTCAAGAAGCTGGAGAAAGATGGACTGGTCAAGCGCCGCATCTATCCAACCGTACCTCCAAAAACCGAATTTACTTTGACACCGTTAGGTTTTGAAGTCCTTGCCATAGCCCAATCAGCCAATGCACTAGCCAAAGCTAGTACCGCCATTGAATCACTGAAAGAGGCCCGCGGCGGCCTCTTTTCATAG
PROTEIN sequence
Length: 115
MPDDRRSLRLVATTLAGKWTLPVVYSLKDNTRRYHEIRRHFPKATEKMIIATLKKLEKDGLVKRRIYPTVPPKTEFTLTPLGFEVLAIAQSANALAKASTAIESLKEARGGLFS*