ggKbase home page

qh_3_scaffold_18227_1

Organism: QH_3_TM7_54_7

partial RP 19 / 55 BSCG 24 / 51 MC: 2 ASCG 1 / 38
Location: comp(2..391)

Top 3 Functional Annotations

Value Algorithm Source
Pseudouridine synthase n=1 Tax=Clostridium sp. CAG:609 RepID=R7P7D8_9CLOT similarity UNIREF
DB: UNIREF100
  • Identity: 42.9
  • Coverage: 133.0
  • Bit_score: 106
  • Evalue 1.60e-20
Uncharacterized protein {ECO:0000313|EMBL:KKL74365.1}; Flags: Fragment;; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 45.9
  • Coverage: 133.0
  • Bit_score: 110
  • Evalue 1.60e-21
pseudouridine synthase similarity KEGG
DB: KEGG
  • Identity: 44.8
  • Coverage: 125.0
  • Bit_score: 108
  • Evalue 1.60e-21

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

marine sediment metagenome

Sequences

DNA sequence
Length: 390
ATGTCCGGGGAAAAGCAGCAAGTTACCATCCTGAGCCAAGACGGGTATCTGTTGGTTATCGATAAGCCGGCAGGTATCGCCATGCATCCCGGCAATGGATCTGGGGACGAGGAAACTGTAGTCGATCACCTCGGCAGTGAGGTCAGTGACCGGGATAGCCAGCGGCCGGGTATCGTGCACCGGCTGGATAAGCATACCTCCGGTGTCGTGGTAATAGCCAAAGATCCCGGGACCAAAGCATTGCTGCAGCGGCAATTTAAATCACGCCAAGTCAAGAAACGCTACATCGCCGGCGTAGCGGGAGTTCCTGATCGAGCACGGGCCAGGATCGAGGTACCGATCGGCACCCGGCCCAAAAATCCGCTCAAACGGGCGGTCCGCCCAGACGGA
PROTEIN sequence
Length: 130
MSGEKQQVTILSQDGYLLVIDKPAGIAMHPGNGSGDEETVVDHLGSEVSDRDSQRPGIVHRLDKHTSGVVVIAKDPGTKALLQRQFKSRQVKKRYIAGVAGVPDRARARIEVPIGTRPKNPLKRAVRPDG