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qh_3_scaffold_18227_3

Organism: QH_3_TM7_54_7

partial RP 19 / 55 BSCG 24 / 51 MC: 2 ASCG 1 / 38
Location: comp(994..1419)

Top 3 Functional Annotations

Value Algorithm Source
50S ribosomal protein L13 n=1 Tax=Spongiibacter tropicus RepID=UPI0003B3C704 similarity UNIREF
DB: UNIREF100
  • Identity: 60.8
  • Coverage: 102.0
  • Bit_score: 138
  • Evalue 5.50e-30
50S ribosomal protein L13 {ECO:0000256|HAMAP-Rule:MF_01366, ECO:0000256|RuleBase:RU003878}; TaxID=1208365 species="Bacteria; Proteobacteria; Gammaproteobacteria; SAR86 cluster.;" source="SAR86 cluster similarity UNIPROT
DB: UniProtKB
  • Identity: 62.9
  • Coverage: 97.0
  • Bit_score: 136
  • Evalue 3.80e-29
50S ribosomal protein L13 similarity KEGG
DB: KEGG
  • Identity: 61.8
  • Coverage: 102.0
  • Bit_score: 134
  • Evalue 1.70e-29

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Notes

CP, possibly TM7? Jill Banfield (10/23/14)

Taxonomy

SAR86 cluster bacterium SAR86E → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 426
ATGCCCAGCATTCAGACTCCTCTTCACGGCCAACTACAGCCCCGACGCCCACTGAGGAAACAGCCGAAGGAGAGCAGGCGTGAGTACCTACAACCAGAAACNNNNNNNNNNNNNNATAAACCGACCTATACGCCGCACGTGGATGGCGGCGATGGTGTCATAGTGATTAATGCCAGCAAGGTGAAGGTGACGGGTAAGAAGTACACCGATAAGATGTATTATCGGCATTCAGGTTATCCGGGCGGTTTGAAAACCAAAAACTTCCAGCAAGAGATCACCCAACCCCCCCAACGGGTTATCTCCCGGGCGGTGGCGGGTATGCTGCCGGATAATAAATTACGTGATCGGCGCCTGAAGCGATTAAAAGTCTATAAAGGTGAAGCACACCCCCATAGCGGGCAACAACCAGTGGAGCTGAACATATGA
PROTEIN sequence
Length: 142
MPSIQTPLHGQLQPRRPLRKQPKESRREYLQPEXXXXXXKPTYTPHVDGGDGVIVINASKVKVTGKKYTDKMYYRHSGYPGGLKTKNFQQEITQPPQRVISRAVAGMLPDNKLRDRRLKRLKVYKGEAHPHSGQQPVELNI*