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qs_1_scaffold_26561_2

Organism: QS_1_TM7_53_6

partial RP 31 / 55 MC: 2 BSCG 33 / 51 MC: 1 ASCG 3 / 38
Location: 446..988

Top 3 Functional Annotations

Value Algorithm Source
50S ribosomal protein L6 n=1 Tax=Candidatus Paceibacter normanii SCGC AAA255-P19 RepID=UPI000371A5D4 similarity UNIREF
DB: UNIREF100
  • Identity: 54.7
  • Coverage: 179.0
  • Bit_score: 195
  • Evalue 4.90e-47
rplF; 50S ribosomal protein L6; K02933 large subunit ribosomal protein L6 Tax=RIFCSPLOWO2_01_FULL_RIF_OD1_06_38_12b_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 55.4
  • Coverage: 177.0
  • Bit_score: 198
  • Evalue 1.10e-47
rplF; 50S ribosomal protein L6 similarity KEGG
DB: KEGG
  • Identity: 51.6
  • Coverage: 182.0
  • Bit_score: 179
  • Evalue 7.80e-43

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Notes

Possibly OP11 Jill Banfield (11/4/14)

Taxonomy

R_RIF_OD1_06_38_12b → RIF-OD1-6 → Parcubacteria → Bacteria

Sequences

DNA sequence
Length: 543
ATGTCGCGTGTTGGAAAATATCCCATTATAATCCCTCAAGGAGTAAGCATCACAAAGGAAGATCAAGTGGTCACGGCGGAAGGTCCGAAAGGGACGCTTTCCACCGTCGTAGGCGAAGATTTTGTGGTTGACATTAATGATGGTGAAGTCTTCGTACTGCCTCGCAAGGAGAAAATCAGTCAAGATTTGAAAGCCTACTGGGGGTTGTACCGTTCGTTGGTGCAAAACATTGTTCAAGGCGTACACGAAGGATACTTCAAGAAACTGCAAGTTGAAGGAGTTGGCTATCGCGTTCAAGCCGAAGGTGAGCAAGATCTCGTACTCAACCTCGGGTATTCTCATGAGGTGAGAGTCAGTGCTCCGGAAGGCGTCAAGTTTTCCGTTGAAAAAAACGAGATAACCGTAACGGGCATTGATAAACAGGTGGTTGGCCAAGTTGCGGCCGACATTCGCGCCAAGCGAGTTCCGGAGCCGTACAAAGGCAAGGGAATTCGGTATTCGGATGAGAAAGTTCGAATGAAAGAAGGTAAGACGGCCTCGTAG
PROTEIN sequence
Length: 181
MSRVGKYPIIIPQGVSITKEDQVVTAEGPKGTLSTVVGEDFVVDINDGEVFVLPRKEKISQDLKAYWGLYRSLVQNIVQGVHEGYFKKLQVEGVGYRVQAEGEQDLVLNLGYSHEVRVSAPEGVKFSVEKNEITVTGIDKQVVGQVAADIRAKRVPEPYKGKGIRYSDEKVRMKEGKTAS*