ggKbase home page

ACD1_69_14

Organism: ACD1

near complete RP 51 / 55 MC: 12 BSCG 49 / 51 MC: 2 ASCG 0 / 38
Location: comp(10601..11278)

Top 3 Functional Annotations

Value Algorithm Source
rplA; 50S ribosomal protein L1 similarity KEGG
DB: KEGG
  • Identity: 53.1
  • Coverage: 224.0
  • Bit_score: 256
  • Evalue 8.20e-66
RIBOSOMAL_L1 (db=PatternScan db_id=PS01199 from=120 to=138 evalue=0.0 interpro_id=IPR023673 interpro_description=Ribosomal protein L1, conserved site) iprscan interpro
DB: PatternScan
  • Identity: null
  • Coverage: null
  • Bit_score: null
  • Evalue 0.0
rplA_bact: ribosomal protein L1 (db=HMMTigr db_id=TIGR01169 from=2 to=225 evalue=3.8e-118 interpro_id=IPR005878 interpro_description=Ribosomal protein L1, bacterial-type GO=Molecular Function: RNA binding (GO:0003723), Molecular Function: structural constituent of ribosome (GO:0003735), Biological Process: translation (GO:0006412), Cellular Component: large ribosomal subunit (GO:0015934)) iprscan interpro
DB: HMMTigr
  • Identity: null
  • Coverage: null
  • Bit_score: null
  • Evalue 3.80e-118

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

GWD2_OD1_38_7 → Moranbacteria → Parcubacteria → Bacteria

Sequences

DNA sequence
Length: 678
ATGAAACACGGAAAAAAGTATCGCGGCGTTGCCGAAAAAGTTGAAAAGAATAAATTGTATGATGTAGTTGAGGCTTTGCAGATCGTACGAGAGGGAAAGATTGCAAAATTTGATGAATCTGTTGAGGTTCACATCAAACTTGCAGTTGATCCAAAAAAAGGAGATGAGCAAGTCCGTGGAGCAATCGTGCTTCCTCATGGAACAGGAAAAACTGCAAGAGTTGCAGTAGTTACTTCAACTAAAACTAAGGAAGCTCAGGATGCCGGTGCTGACATCGTTGGCGGAGAAGAACTTATTGAAAAAATCAAACTTGGAAAAATGGAAGAAGTTGATGTTATTGTGGCTAGTCCGGAAATGATGCCGAAACTTGCCAGCGTAGCTAAGATCCTTGGGCCCCGAGGCTTAATGCCAAGTCCTAAGACTGAAACCGTTACTGATAAAATTAAAGAAGCTGTTGAATCACTTAAGAAAGGTAAGCTTTCTTTCAAGAACGATAATACTGGAAATGTTCATCAGGTAATCGGAAAACTTTCTTTTGATGCGAAAAAACTTGAAGAAAATTATGCAGCATTTGTTGACGCAATTCAGAAAGCTCGTCCATCTGGAGTGAAAGGAAAATACATGGTTTCTGTTTCTGTTTGTTCAACCATGGGACCAGGAGTTAAAGTTATCTTGTAA
PROTEIN sequence
Length: 226
MKHGKKYRGVAEKVEKNKLYDVVEALQIVREGKIAKFDESVEVHIKLAVDPKKGDEQVRGAIVLPHGTGKTARVAVVTSTKTKEAQDAGADIVGGEELIEKIKLGKMEEVDVIVASPEMMPKLASVAKILGPRGLMPSPKTETVTDKIKEAVESLKKGKLSFKNDNTGNVHQVIGKLSFDAKKLEENYAAFVDAIQKARPSGVKGKYMVSVSVCSTMGPGVKVIL*