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ACD36_35_4

Organism: ACD36

partial RP 15 / 55 MC: 2 BSCG 11 / 51 MC: 1 ASCG 0 / 38
Location: comp(2547..3098)

Top 3 Functional Annotations

Value Algorithm Source
sigma-70 family RNA polymerase sigma factor similarity KEGG
DB: KEGG
  • Identity: 78.8
  • Coverage: 184.0
  • Bit_score: 288
  • Evalue 1.20e-75
SIGMA70_2 (db=PatternScan db_id=PS00716 from=143 to=169 evalue=0.0 interpro_id=IPR000943 interpro_description=RNA polymerase sigma-70 factor GO=Molecular Function: DNA binding (GO:0003677), Molecular Function: transcription factor activity (GO:0003700), Biological Process: transcription initiation (GO:0006352), Biological Process: regulation of transcription, DNA-dependent (GO:0006355), Molecular Function: sigma factor activity (GO:0016987)) iprscan interpro
DB: PatternScan
  • Identity: null
  • Coverage: null
  • Bit_score: null
  • Evalue 0.0
Sigma70_r3 (db=HMMPfam db_id=PF04539 from=30 to=105 evalue=1.1e-28 interpro_id=IPR007624 interpro_description=RNA polymerase sigma-70 region 3 GO=Molecular Function: DNA binding (GO:0003677), Molecular Function: transcription factor activity (GO:0003700), Biological Process: transcription initiation (GO:0006352), Biological Process: regulation of transcription, DNA-dependent (GO:0006355), Molecular Function: sigma factor activity (GO:0016987)) iprscan interpro
DB: HMMPfam
  • Identity: null
  • Coverage: null
  • Bit_score: null
  • Evalue 1.10e-28

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Taxonomy

R_OP11_Gottesmanbacteria_43_11b → Gottesmanbacteria → Microgenomates → Bacteria

Sequences

DNA sequence
Length: 552
ACCTATGCAACCTGGTGGATCCGTCAGGCTATAACCCGCGCAATCGCCGATCAAGCAAGGACAATAAGAATCCCAGTCCACATGGTTGAGACAATCAATCGCTTTGTCCGCGCAAGCCGACGACTTATGCAGGAGTTGGGGCGCGAGCCAACACCGGAAGAAATTGCAAAGGTCATGGAAATTGATGTTACCAAGGTTCGGGAGATTATGAAAGTAAGCCAGGAACCAACGAGTCTTGAAACACCGGTGGGCGATGAGGAAGATAGTCACTTGGGCGATTTTATTTCAGATCCGGGGCCAACGCCGTACGACCAAACGAGCAGGCAACTTCTCAAAGAACATATGGAAGAAGTCTTAACTACTCTATCTGACCGTGAGAAAAGAGTGTTGATTCTCCGATTCGGTTTAGAAGACGGAAGGCCGCGGACGCTTGAAGAGGTCGGTGCCCAGTTTGGCGTTACCCGAGAGCGTATTCGGCAAATAGAGGCAAAAGCTTTACGGAAATTGCGCCATCCTTCACGAAGTAAAAAACTTAAAGATTACCTAGAGTGA
PROTEIN sequence
Length: 184
TYATWWIRQAITRAIADQARTIRIPVHMVETINRFVRASRRLMQELGREPTPEEIAKVMEIDVTKVREIMKVSQEPTSLETPVGDEEDSHLGDFISDPGPTPYDQTSRQLLKEHMEEVLTTLSDREKRVLILRFGLEDGRPRTLEEVGAQFGVTRERIRQIEAKALRKLRHPSRSKKLKDYLE*