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07m_4_Miz_z4_200_2014_Intersect_009_092_Parcubacteria_43_3

07m_4_2014_Parcubacteria_43_3

In projects: 07m_4_2014 | cpr-dpann-all | mizunami_genomes | all_cpr_genomes | ggK_CPR

Consensus taxonomy: Parcubacteria → Bacteria

Metagenomic Context

Parent: 07m_4_2014_UNK

Properties

Avg. coverage: 3.04 Longest contig: 14.17 Kbp Bin length: 575.72 Kbp GC content: 42.65 %

Contigs count: 193 Features count: 724 rRNAs count: 0 tRNAs count: 33

Genome completeness

partial RP 31 / 55 MC: 4 BSCG 35 / 51 MC: 5 ASCG 6 / 38 MC: 2

Description

old name; 07m_4_2014_Intersect_009_092

Displaying items 101-150 of 193 in total

contig	# features	sequence size	GC content (%)	Cov	Coding Density (%)
07M_4_2014_scaffold_11429 Phylum: Parcubacteria (100%)	3	3623 bp	45.76	4.10	95.23
07M_4_2014_scaffold_26631 Species: Parcubacteria bacterium GW2011_GWB1_43_8b (66.67%)	3	1996 bp	45.44	2.40	96.94
07M_4_2014_scaffold_58888 Species: RBG_13_Bacteroidetes_43_22_curated (50%)	2	1099 bp	45.13	2.18	88.44
07M_4_2014_scaffold_23307 Species: CG_Kuenen_02 (50%)	2	2202 bp	44.19	1.84	107.36
07M_4_2014_scaffold_49394 Species: RIFOXYD2_FULL_Elusimicrobia_34_15_curated (50%)	2	1256 bp	39.97	2.39	94.82
07M_4_2014_scaffold_45544 Species: RIFOXYC2_FULL_OD1_Uhrbacteria_47_19_curated (50%)	2	1336 bp	46.78	2.25	101.95
07M_4_2014_scaffold_23572 Species: RIFOXYA2_FULL_OD1_Falkowbacteria_38_12_curated (100%)	2	2184 bp	46.47	1.51	95.05
07M_4_2014_scaffold_20086 Species: R_SM2F11_49_9 (50%)	2	2447 bp	40.62	3.74	96.61
07M_4_2014_scaffold_40545 Species: RBG_13_OD1_Falkowbacteria_39_14_curated (50%)	2	1462 bp	42.13	2.67	99.93
07M_4_2014_scaffold_19040 Species: marine sediment metagenome (50%)	2	2539 bp	41.91	2.95	97.48
07M_4_2014_scaffold_66201 Species: GWA2_OD1_45_13 (50%)	2	1004 bp	42.23	1.94	89.04
07M_4_2014_scaffold_43882 Species: BJP_IG2069_Syntrophobacterales_47_18 (50%)	2	1374 bp	45.85	2.40	77.51
07M_4_2014_scaffold_44486 Species: R_OD1_39_11 (100%)	2	1360 bp	44.12	2.65	99.71
07M_4_2014_scaffold_54776 Species: R_OD1_42_9 (100%)	2	1161 bp	45.56	3.36	95.87
07M_4_2014_scaffold_35032 Species: R_OD1_42_9 (100%)	2	1631 bp	44.39	3.13	93.07
07M_4_2014_scaffold_18699 Species: R_OD1_Wolfebacteria_38_11 (50%)	2	2570 bp	44.63	2.39	100.16
07M_4_2014_scaffold_57812 Species: RBG_13_WOR_2_41_10_curated (50%)	2	1115 bp	41.17	5.65	99.82
07M_4_2014_scaffold_14405 Species: RBG_19FT_COMBO_JS1_35_14_curated (50%)	2	3090 bp	43.56	5.29	82.04
07M_4_2014_scaffold_58711 Species: RIFOXYD2_FULL_Elusimicrobia_34_15_curated (100%)	2	1102 bp	39.29	1.91	99.36
07M_4_2014_scaffold_26715 Species: RIFOXYD12_FULL_OD1_Wolfebacteria_48_21_curated (50%)	2	1992 bp	45.13	3.61	85.24
07M_4_2014_scaffold_20673 Species: R_RIF_OD1_12_48_27 (50%)	2	2400 bp	41.04	2.88	97.75
07M_4_2014_scaffold_41531 Species: RIFOXYA2_FULL_OD1_Falkowbacteria_38_12_curated (100%)	2	1434 bp	46.86	1.67	93.51
07M_4_2014_scaffold_41534 Species: CG_Kuenen_03 (50%)	2	1434 bp	40.93	1.36	91.42
07M_4_2014_scaffold_43952 Species: CG_CPR17-01 (50%)	2	1373 bp	41.81	3.06	97.89
07M_4_2014_scaffold_52816 Species: GWB2_OD1_rel_46_37 (50%)	2	1194 bp	44.14	3.27	99.25
07M_4_2014_scaffold_12978 Species: GWF2_OD1_38_76 (50%)	2	3321 bp	41.95	3.61	90.88
07M_4_2014_scaffold_58985 Species: RIFOXYA2_FULL_OD1_Falkowbacteria_38_12_curated (50%)	2	1098 bp	44.26	1.91	97.81
07M_4_2014_scaffold_44047 Species: R_OD1_42_9 (100%)	2	1371 bp	42.23	3.28	93.22
07M_4_2014_scaffold_7914 Species: GWA1_OD1_37_20_partial (50%)	2	4653 bp	46.42	3.45	99.87
07M_4_2014_scaffold_32802 Species: RIFOXYD2_FULL_Elusimicrobia_34_15_curated (50%)	2	1716 bp	39.39	1.75	100.00
07M_4_2014_scaffold_43460 Species: R_OD1_Wolfebacteria_42_16 (100%)	2	1385 bp	42.60	2.60	97.04
07M_4_2014_scaffold_49513 Species: GWA1_OD1_44_24_partial (50%)	2	1254 bp	42.03	1.91	90.67
07M_4_2014_scaffold_55743 Species: R_OD1_42_9 (50%)	2	1146 bp	42.23	2.88	97.38
07M_4_2014_scaffold_53434 Species: RIFOXYD2_FULL_Elusimicrobia_34_15_curated (50%)	2	1183 bp	42.18	1.52	91.55
07M_4_2014_scaffold_50397 Species: RIFOXYD2_FULL_Elusimicrobia_34_15_curated (50%)	2	1237 bp	43.73	2.43	85.85
07M_4_2014_scaffold_45935 Species: R_OD1_42_9 (100%)	2	1326 bp	46.38	1.92	81.67
07M_4_2014_scaffold_65735 Species: R_OD1_42_9 (50%)	2	1010 bp	41.68	3.42	99.50
07M_4_2014_scaffold_47699 Species: GWA2_OD1_42_32 (50%)	2	1290 bp	44.57	2.91	63.72
07M_4_2014_scaffold_40186 Species: RLO_OD1_Jorgensenbacteria_42_11 (100%)	2	1472 bp	44.43	2.75	94.36
07M_4_2014_scaffold_39064 Species: R_OD1_42_9 (50%)	2	1503 bp	41.92	2.30	75.25
07M_4_2014_scaffold_39320 Species: R_OD1_42_9 (100%)	2	1496 bp	42.25	4.51	95.25
07M_4_2014_scaffold_37996 Species: BJP_IG2102_Elusimicrobia_52_42 (50%)	2	1535 bp	44.76	1.76	101.04
07M_4_2014_scaffold_47724 Species: R_OD1_48_18 (50%)	2	1290 bp	44.34	2.21	90.00
07M_4_2014_scaffold_20264 Species: RIFOXYA2_FULL_OD1_Falkowbacteria_38_12_curated (50%)	2	2432 bp	44.04	1.42	99.42
07M_4_2014_scaffold_61411 Species: Parcubacteria bacterium GW2011_GWA1_49_26 (50%)	2	1065 bp	43.19	2.11	104.04
07M_4_2014_scaffold_60263 Species: BJP_IG2102_Elusimicrobia_52_42 (100%)	2	1081 bp	40.80	1.11	98.52
07M_4_2014_scaffold_46073 Species: marine sediment metagenome (50%)	2	1323 bp	48.83	1.70	71.88
07M_4_2014_scaffold_56868 Species: RIFOXYD2_FULL_Elusimicrobia_34_30_curated (50%)	2	1129 bp	40.39	1.20	96.99
07M_4_2014_scaffold_17374 Species: RHI_OD1_43_12 (50%)	2	2713 bp	44.42	2.54	95.65
07M_4_2014_scaffold_22490 Species: R_OD1_42_9 (50%)	2	2258 bp	42.87	2.86	83.44

Displaying items 101-150 of 193 in total

Ribosomal proteins shown here were identified using keyword searches of all annotations.

The SCGs are found by conducting USEARCH with a custom database.

Warning! This will delete the current organism (07m_4_Miz_z4_200_2014_Intersect_009_092_Parcubacteria_43_3) and add all its contigs / scaffolds to the organism you choose below

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07m_4_Miz_z4_200_2014_Intersect_009_092_Parcubacteria_43_3

Description

Ribosomal proteins shown here were identified using keyword searches of all annotations.

The SCGs are found by conducting USEARCH with a custom database.

The SCGs are found by conducting USEARCH with a custom database.

Merge with other organism

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