ggKbase home page

ACD50_147_5

Organism: ACD50

near complete RP 51 / 55 MC: 21 BSCG 45 / 51 MC: 9 ASCG 0 / 38
Location: 1922..2458

Top 3 Functional Annotations

Value Algorithm Source
50S ribosomal protein L6 similarity KEGG
DB: KEGG
  • Identity: 49.7
  • Coverage: 177.0
  • Bit_score: 183
  • Evalue 4.10e-44
L6_bact: ribosomal protein L6 (db=HMMTigr db_id=TIGR03654 from=2 to=175 evalue=1.7e-77 interpro_id=IPR019906 interpro_description=Ribosomal protein L6, bacterial-type GO=Molecular Function: structural constituent of ribosome (GO:0003735), Cellular Component: ribosome (GO:0005840), Biological Process: translation (GO:0006412), Molecular Function: rRNA binding (GO:0019843)) iprscan interpro
DB: HMMTigr
  • Identity: null
  • Coverage: null
  • Bit_score: null
  • Evalue 1.70e-77
60S/50S RIBOSOMAL PROTEIN L6/L9 (db=HMMPanther db_id=PTHR11655 from=2 to=177 evalue=1.5e-61 interpro_id=IPR000702 interpro_description=Ribosomal protein L6 GO=Molecular Function: structural constituent of ribosome (GO:0003735), Cellular Component: ribosome (GO:0005840), Biological Process: translation (GO:0006412), Molecular Function: rRNA binding (GO:0019843)) iprscan interpro
DB: HMMPanther
  • Identity: null
  • Coverage: null
  • Bit_score: null
  • Evalue 1.50e-61

Lists

This feature is not on any list.

Notes

excluded phylogenetic concatenation practice v1 kelly wrighton (11/15/12)

Taxonomy

uncultured bacterium → Bacteria

Sequences

DNA sequence
Length: 537
ATGAGTAGATTAGGAAAAAGACCGATAGCCATACCGGACGGAATCGCTGTCGAGGTTAAAGACAACACCGTTTCAATCAAAGGATCCAAAGGATCTCTTTCTTTCGACTTTAAAAAAGAGGTTTCTGTCAACGTTTCCGAAGAAGGAGTTTTGGTGGAAAAGAAGGGGAAATCCAAGGATGCGCCTGCAATCTGGGGAACGACGGCCAGAATGGTCGAGAATATGATTATCGGGGTATCGCAGGGGTTCCAGAAACAGCTTGAGCTAAACGGTGTCGGCTTTAGGATGTCGGTTGCGGGAAAAAAGATAAATCTCGCGTTGGGATTTTCCCATCCGGTGGAAGTGGAAATAGTTGACGGAATAGAAGTGAAGATAGAAGGAAACGTGATGACGGTTTCAGGAATAGACAAGCATGCCGTCGGTCAGTTTTCTGCCAATATCAAAAAATTGAAACCGGTGGAGCCGTATAAAGGGAAAGGTTTCAAATATGTAGGGGAACAGGTGAGGCGGAAAGAAGGAAAGCGGTCGGCCGCCTAA
PROTEIN sequence
Length: 179
MSRLGKRPIAIPDGIAVEVKDNTVSIKGSKGSLSFDFKKEVSVNVSEEGVLVEKKGKSKDAPAIWGTTARMVENMIIGVSQGFQKQLELNGVGFRMSVAGKKINLALGFSHPVEVEIVDGIEVKIEGNVMTVSGIDKHAVGQFSANIKKLKPVEPYKGKGFKYVGEQVRRKEGKRSAA*