ggKbase home page

S_p2_S4_coassembly_Deltaproteobacteria_53_32

In projects: S_p2_S4_coassembly  |  genasci-metabolism  |  all_nc_groundwater_genomes

Consensus taxonomy: Deltaproteobacteria  →  Proteobacteria  →  Bacteria

Description

GD17-1_Sp2_coassembly_Maxbin2_420 RK

Displaying items 1-50 of 256 in total
contig # features sequence size GC content (%) Cov Coding Density (%)
S_p2_S4_coassembly_k141_3132961
Class: Deltaproteobacteria (62.96%)
27 19010 bp 52.33 33.20 87.60
S_p2_S4_coassembly_k141_750953
Class: Deltaproteobacteria (72%)
25 22438 bp 53.46 33.94 91.89
S_p2_S4_coassembly_k141_2719729
Class: Deltaproteobacteria (66.67%)
24 21773 bp 52.16 32.85 90.90
S_p2_S4_coassembly_k141_1131205
Domain: Bacteria (86.96%)
23 18409 bp 52.29 33.03 94.26
S_p2_S4_coassembly_k141_49001
Species: GWA2_Deltaproteobacteria_45_12_curated (57.14%)
21 23002 bp 53.65 33.09 92.27
S_p2_S4_coassembly_k141_3071955
Species: GWA2_Deltaproteobacteria_45_12_curated (52.38%)
21 22222 bp 52.74 33.84 91.63
S_p2_S4_coassembly_k141_4056232
Species: GWA2_Deltaproteobacteria_45_12_curated (52.38%)
21 20458 bp 52.21 30.44 90.54
S_p2_S4_coassembly_k141_1325389
Species: GWA2_Deltaproteobacteria_45_12_curated (50%)
20 19013 bp 52.54 31.18 96.50
S_p2_S4_coassembly_k141_2220412
Class: Deltaproteobacteria (75%)
20 19262 bp 51.92 31.20 89.60
S_p2_S4_coassembly_k141_2864675
Species: GWA2_Deltaproteobacteria_45_12_curated (55%)
20 21246 bp 53.96 34.11 94.44
S_p2_S4_coassembly_k141_381200
Class: Deltaproteobacteria (63.16%)
19 20355 bp 51.31 31.09 93.71
S_p2_S4_coassembly_k141_812154
Species: GWA2_Deltaproteobacteria_45_12_curated (50%)
18 16087 bp 51.26 29.95 90.84
S_p2_S4_coassembly_k141_3661453
Class: Deltaproteobacteria (77.78%)
18 15245 bp 53.62 33.02 92.00
S_p2_S4_coassembly_k141_1813959
Class: Deltaproteobacteria (61.11%)
18 18096 bp 52.95 32.56 91.79
S_p2_S4_coassembly_k141_117049
Class: Deltaproteobacteria (58.82%)
17 21959 bp 52.84 32.05 95.28
S_p2_S4_coassembly_k141_2517930
Class: Deltaproteobacteria (58.82%)
17 16513 bp 53.05 30.98 96.29
S_p2_S4_coassembly_k141_350674
Class: Deltaproteobacteria (88.24%)
17 15300 bp 50.65 30.97 92.94
S_p2_S4_coassembly_k141_2123831
Species: GWA2_Deltaproteobacteria_45_12_curated (58.82%)
17 19672 bp 52.10 34.10 96.38
S_p2_S4_coassembly_k141_659418
Class: Deltaproteobacteria (68.75%)
16 20039 bp 51.80 33.24 89.96
S_p2_S4_coassembly_k141_3696513
Species: GWA2_Deltaproteobacteria_45_12_curated (50%)
16 12988 bp 52.76 32.33 89.04
S_p2_S4_coassembly_k141_2464889
Class: Deltaproteobacteria (53.33%)
15 14995 bp 53.40 34.09 93.19
S_p2_S4_coassembly_k141_333999
Class: Deltaproteobacteria (53.33%)
15 12928 bp 50.71 30.86 82.59
S_p2_S4_coassembly_k141_494099
Phylum: Proteobacteria (53.33%)
15 13671 bp 54.36 37.90 96.14
S_p2_S4_coassembly_k141_1914377
Class: Deltaproteobacteria (53.33%)
15 13459 bp 52.06 30.24 92.86
S_p2_S4_coassembly_k141_1149318
Class: Deltaproteobacteria (85.71%)
14 8916 bp 51.75 32.34 91.96
S_p2_S4_coassembly_k141_2229353
Species: GWA2_Deltaproteobacteria_45_12_curated (61.54%)
13 12321 bp 52.27 31.56 93.89
S_p2_S4_coassembly_k141_1053202
Species: GWA2_Deltaproteobacteria_45_12_curated (53.85%)
13 10735 bp 52.19 33.03 94.40
S_p2_S4_coassembly_k141_2080164
Class: Deltaproteobacteria (53.85%)
13 14301 bp 52.19 34.38 96.56
S_p2_S4_coassembly_k141_1527511
Class: Deltaproteobacteria (69.23%)
13 11743 bp 51.40 32.94 86.45
S_p2_S4_coassembly_k141_1901076
Domain: Bacteria (100%)
13 12635 bp 52.60 31.80 90.63
S_p2_S4_coassembly_k141_2880858
Class: Deltaproteobacteria (69.23%)
13 10088 bp 52.27 33.05 93.20
S_p2_S4_coassembly_k141_396536
Species: GWA2_Deltaproteobacteria_45_12_curated (58.33%)
12 8764 bp 51.52 31.27 90.40
S_p2_S4_coassembly_k141_3055655 12 10320 bp 54.33 36.66 88.02
S_p2_S4_coassembly_k141_3859705
Domain: Bacteria (91.67%)
12 10953 bp 54.08 30.51 97.67
S_p2_S4_coassembly_k141_1355079
Species: RLO_Deltaproteobacteria_40_28 (50%)
12 13371 bp 53.72 33.59 94.10
S_p2_S4_coassembly_k141_873893
Class: Deltaproteobacteria (58.33%)
12 9142 bp 50.98 29.89 94.25
S_p2_S4_coassembly_k141_1011636
Domain: Bacteria (66.67%)
12 10627 bp 51.56 31.21 96.35
S_p2_S4_coassembly_k141_2503589
Species: GWA2_Deltaproteobacteria_45_12_curated (58.33%)
12 12831 bp 52.64 30.40 94.48
S_p2_S4_coassembly_k141_267198
Class: Deltaproteobacteria (66.67%)
12 10039 bp 49.90 27.64 94.42
S_p2_S4_coassembly_k141_2124847
Domain: Bacteria (58.33%)
12 13590 bp 54.31 33.28 96.20
S_p2_S4_coassembly_k141_1216015
Class: Deltaproteobacteria (50%)
12 7923 bp 50.94 32.17 83.78
S_p2_S4_coassembly_k141_522800
Class: Deltaproteobacteria (75%)
12 12260 bp 52.93 32.67 95.04
S_p2_S4_coassembly_k141_3552582
Class: Deltaproteobacteria (50%)
12 9414 bp 52.51 34.26 84.82
S_p2_S4_coassembly_k141_1578248
Species: RLO_Deltaproteobacteria_40_28 (58.33%)
12 11334 bp 52.43 29.49 90.52
S_p2_S4_coassembly_k141_767611
Class: Deltaproteobacteria (90.91%)
11 8413 bp 51.62 30.36 92.71
S_p2_S4_coassembly_k141_3146615
Species: GWA2_Deltaproteobacteria_45_12_curated (54.55%)
11 12266 bp 53.16 34.40 95.63
S_p2_S4_coassembly_k141_3824899
Phylum: Proteobacteria (54.55%)
11 10135 bp 53.30 32.96 97.30
S_p2_S4_coassembly_k141_1114071
Species: GWA2_Deltaproteobacteria_45_12_curated (72.73%)
11 10093 bp 53.24 30.21 94.69
S_p2_S4_coassembly_k141_3326036
Species: RLO_Deltaproteobacteria_40_28 (63.64%)
11 14337 bp 54.13 36.26 94.02
S_p2_S4_coassembly_k141_221511
Domain: Bacteria (90.91%)
11 10723 bp 52.73 30.06 96.97
Displaying items 1-50 of 256 in total

Ribosomal proteins shown here were identified using keyword searches of all annotations.

The SCGs are found by conducting USEARCH with a custom database.

The SCGs are found by conducting USEARCH with a custom database.