ggKbase home page

S_p2_S4_coassembly_Aenigmarchaeota_44_80

S_p2_S4_coassembly_unknown_44_82
In projects: S_p2_S4_coassembly  |  genasci-metabolism  |  NC_groundwater_CPR_DPANN  |  DPANN  |  all_nc_groundwater_genomes

Consensus taxonomy:

Description

S_p2_S4_coassembly_Aenigma_Micrachaeota_44_80; GD17-1_Sp2_coassembly_Maxbin2_176 RK

Displaying items 51-85 of 85 in total
contig # features sequence size GC content (%) Cov Coding Density (%)
S_p2_S4_coassembly_k141_3032280 3 3265 bp 43.74 80.49 91.70
S_p2_S4_coassembly_k141_2224296
Phylum: DPANN (50%)
42 37602 bp 43.94 85.96 91.85
S_p2_S4_coassembly_k141_4070028
Domain: Archaea (60%)
5 4741 bp 42.33 74.64 91.88
S_p2_S4_coassembly_k141_2744557
Domain: Archaea (56.52%)
23 19286 bp 43.07 79.43 91.90
S_p2_S4_coassembly_k141_3789276
Species: AR5 (50%)
2 3642 bp 45.28 74.01 92.01
S_p2_S4_coassembly_k141_992393 10 9241 bp 45.21 75.30 92.17
S_p2_S4_coassembly_k141_366871
Domain: Archaea (54.76%)
42 36808 bp 44.00 89.30 92.49
S_p2_S4_coassembly_k141_2104273
Species: AR5 (50%)
10 11016 bp 44.36 84.07 92.76
S_p2_S4_coassembly_k141_4073918
Species: AR5 (66.67%)
15 12463 bp 42.46 78.40 92.89
S_p2_S4_coassembly_k141_1162133
Domain: Archaea (55.56%)
18 12623 bp 43.77 79.68 92.97
S_p2_S4_coassembly_k141_1511253 10 5711 bp 44.35 82.31 92.98
S_p2_S4_coassembly_k141_2531704 25 25873 bp 45.31 78.20 93.12
S_p2_S4_coassembly_k141_2717843
Domain: Archaea (66.67%)
39 25527 bp 46.26 93.55 93.24
S_p2_S4_coassembly_k141_3029417
Domain: Archaea (50%)
8 7264 bp 45.36 86.79 93.38
S_p2_S4_coassembly_k141_3222838
Domain: Archaea (50%)
4 3170 bp 44.64 74.01 93.50
S_p2_S4_coassembly_k141_393158
Phylum: DPANN (50%)
4 2916 bp 44.99 81.02 93.72
S_p2_S4_coassembly_k141_431481 8 4340 bp 44.26 82.50 94.08
S_p2_S4_coassembly_k141_2205752 17 16256 bp 43.89 82.79 94.14
S_p2_S4_coassembly_k141_2222486 3 3457 bp 44.11 84.78 94.16
S_p2_S4_coassembly_k141_23983
Domain: Archaea (66.67%)
6 3383 bp 44.34 76.09 94.35
S_p2_S4_coassembly_k141_2163111 19 15713 bp 43.28 87.41 94.83
S_p2_S4_coassembly_k141_2179458 10 7238 bp 44.17 79.85 95.08
S_p2_S4_coassembly_k141_2496564
Domain: Archaea (50%)
54 47749 bp 44.05 82.89 95.34
S_p2_S4_coassembly_k141_1842296
Domain: Archaea (50%)
20 13596 bp 43.69 79.69 95.39
S_p2_S4_coassembly_k141_4002170 6 4669 bp 45.98 83.34 95.42
S_p2_S4_coassembly_k141_1572368
Domain: Archaea (50%)
12 7487 bp 44.81 82.52 95.45
S_p2_S4_coassembly_k141_1000857 11 8736 bp 44.51 81.28 95.60
S_p2_S4_coassembly_k141_3296651 12 9587 bp 44.64 77.64 95.82
S_p2_S4_coassembly_k141_620489 15 12211 bp 43.45 78.52 95.89
S_p2_S4_coassembly_k141_2168031
Domain: Archaea (66.67%)
3 2714 bp 44.33 95.06 96.61
S_p2_S4_coassembly_k141_2377426
Domain: Archaea (50%)
12 9154 bp 45.81 75.67 96.71
S_p2_S4_coassembly_k141_606080
Domain: Archaea (50%)
4 3350 bp 44.45 80.46 96.90
S_p2_S4_coassembly_k141_4132698
Domain: Archaea (63.64%)
11 7909 bp 45.32 90.81 97.22
S_p2_S4_coassembly_k141_3980181
Species: archaeon GW2011_AR3 (50%)
2 2084 bp 42.08 80.76 98.03
S_p2_S4_coassembly_k141_1447508
Domain: Archaea (57.14%)
7 7100 bp 41.97 81.30 98.58
Displaying items 51-85 of 85 in total

Ribosomal proteins shown here were identified using keyword searches of all annotations.

The SCGs are found by conducting USEARCH with a custom database.

The SCGs are found by conducting USEARCH with a custom database.