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AR_MS4_05142019_scaffold_1771_21

Organism: Alum_Rock_2019_MS4_unknown_57_51

near complete RP 42 / 55 MC: 2 BSCG 46 / 51 MC: 3 ASCG 10 / 38 MC: 1
Location: 20634..22370

Top 3 Functional Annotations

Value Algorithm Source
Putative sigma54 specific transcriptional regulator n=1 Tax=Syntrophothermus lipocalidus (strain DSM 12680 / TGB-C1) RepID=D7CLS8_SYNLT similarity UNIREF
DB: UNIREF100
  • Identity: 47.0
  • Coverage: 566.0
  • Bit_score: 516
  • Evalue 2.30e-143
sigma54 specific transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 47.0
  • Coverage: 566.0
  • Bit_score: 516
  • Evalue 6.60e-144
Tax=RBG_16_Deltaproteobacteria_47_11_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 66.3
  • Coverage: 575.0
  • Bit_score: 756
  • Evalue 2.50e-215

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Taxonomy

RBG_16_Deltaproteobacteria_47_11_curated → Deltaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1737
ATGGAAAATCCCTTGCATTTTGACCCGCTTTTGCTGCTCAACTCCATCTACAACGGCATCGTCGCGATCGATACCGCCGGGATAGTCGTCTATTTCAACAAAACGGCCGAACGTATCCTGAAGACGACGGCATCGGAGGCAATGGGCCGCTATGTACTCGATGTTCTTCCCAACACAGGCGGAAAAATCCTCGAATCCCTGCGCACAGGCAAGACATTCCAGACAGAGAAGCTCAAGGGCAAAGAGGTTGATCTCGTCTCCAACATCAGTCCTGTAATCGAGCACGAAGCTATTGTCGGCGTTATCAGCGTCTTTCAGGACACCTCCGAGATCGAAGCCATTTCGAAGGAACTTAATTTTTTCAAGGACATGAAAGGATGGCTCGACACCATCATCAACTCGTCCTTCGACGGTCTCTGGATATGCGACCACGAAGGCAACGCGCTGATGCTCAACAAGGCGTCGGAGCGGATAAACGGGGTGGATGCCCGGCGCGTCATCGGGAAAAACATGCGGGAGCTCGTGCGGGAGGGGATGTTCGACAAATCGGTGACGCTCGAGGTGCTTGACAAAAAGGCCCCGGTCACGATGATTCAAAAGGTGCAAGGCGATAAAAAGATTCTCGTTACCGGCAACCCCATCTTCAACGACCACGGCGACATTATCTTCGTTGTCACCAACGACCGCGACATGACGGAGCTGGACAATCTCCGCAGCCAGTTGCAGGAGGCGCAGGCGCTGGCAAAGGGGTACATCTCCAAACTGTCGCGTCTGCAGCTCGAAGAGGCCGATCTCTCCAACATCGTTTTTCGCAGCGCCGAAATGCAGATCATCATCGAGATGGCGATACGGGTGGCCCAGGTTGACTCGACCATTTTGCTGCTCGGGGAATCAGGGGTTGGAAAGGGGCTGATCGCGTCTCTTATCCACAAGCAGTCCGAGCGCAGCAAGGGACCGTACATTCGCGTCGATCTCGCCGGCATCCCCGACTCCCTGATGGAATCGGAGCTGTTCGGGTATGAAAAAGGGGCCTTTACCGGCGCCAGAACCGAAGGCAAGCCGGGGTTCTTCGAGCTGGCCCACAAGGGAACGCTCTTTCTGGACGAGATCGGCGAGATCCCCCTGGCCTCCCAGTCGAAGCTGCTGCGCTTTCTGGAGGATCACCACATCACCCGCGTCGGGGGTGCCGAATCCCGCGAGATTGACGTTAGAGTCATCGCGGCTACCAACCGAAAAATCGAGGAGATGGTCGCCTCCCGGAATTTCCGCGCCGATTTGTACTACCGCCTGCATGTCGTCCCCATCCATATCCCCTCGCTCCGCGAAAGAAACGGGGATATCCTGCCGCTCGCCTTCCACTACCTGGCCAAATTCAACAAGGCCTACAAGAAAAACAAATCCTTTTCTCCCCAGGTGATCGAGGCGCTCGGCAGATACGACTTTCCCGGAAATATTCGCGAACTGGCCAACCTTATCGAACGGCTGGTGGTTTCAACAGCCCAGGACTACGTGGAATTTCGAGAACTTCCCGGATCCGTAACGGAAAAATACCCCACGCAGTCCATCCCTGACACACTGCCGTTCGAAGGGCTTCCGCTCAAGGAAGCGCTCGAAAGATACGAACGTGAAATCATCGCAAGGTCGCTTAAAAAACACGGCTCGCAGCGGGAAGCCGCCCGGGCGCTTAAGGTTGACCAGGCCACCATTTCCAGAAAGACCAGAAAACGTGATGCATAA
PROTEIN sequence
Length: 579
MENPLHFDPLLLLNSIYNGIVAIDTAGIVVYFNKTAERILKTTASEAMGRYVLDVLPNTGGKILESLRTGKTFQTEKLKGKEVDLVSNISPVIEHEAIVGVISVFQDTSEIEAISKELNFFKDMKGWLDTIINSSFDGLWICDHEGNALMLNKASERINGVDARRVIGKNMRELVREGMFDKSVTLEVLDKKAPVTMIQKVQGDKKILVTGNPIFNDHGDIIFVVTNDRDMTELDNLRSQLQEAQALAKGYISKLSRLQLEEADLSNIVFRSAEMQIIIEMAIRVAQVDSTILLLGESGVGKGLIASLIHKQSERSKGPYIRVDLAGIPDSLMESELFGYEKGAFTGARTEGKPGFFELAHKGTLFLDEIGEIPLASQSKLLRFLEDHHITRVGGAESREIDVRVIAATNRKIEEMVASRNFRADLYYRLHVVPIHIPSLRERNGDILPLAFHYLAKFNKAYKKNKSFSPQVIEALGRYDFPGNIRELANLIERLVVSTAQDYVEFRELPGSVTEKYPTQSIPDTLPFEGLPLKEALERYEREIIARSLKKHGSQREAARALKVDQATISRKTRKRDA*