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AR_MS4_05142019_scaffold_5790_11

Organism: Alum_Rock_2019_MS4_unknown_57_51

near complete RP 42 / 55 MC: 2 BSCG 46 / 51 MC: 3 ASCG 10 / 38 MC: 1
Location: comp(9906..10301)

Top 3 Functional Annotations

Value Algorithm Source
Twitching motility protein PilT {ECO:0000313|EMBL:KFN38245.1}; TaxID=1538640 species="Bacteria; Proteobacteria; Deltaproteobacteria; Syntrophobacterales; Syntrophaceae; Smithella.;" source="Smithella sp. F21.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 79.4
  • Coverage: 131.0
  • Bit_score: 219
  • Evalue 1.90e-54
Probable ribonuclease VapC id=4205428 bin=GWC2_CP_Nitrospirae-rel_42_7 species=delta proteobacterium MLMS-1 genus=unknown taxon_order=unknown taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_CP_Nitrospirae-rel_42_7 organism_group=Nitrospirae similarity UNIREF
DB: UNIREF100
  • Identity: 62.6
  • Coverage: 131.0
  • Bit_score: 180
  • Evalue 6.90e-43
pilT2; protein PilT similarity KEGG
DB: KEGG
  • Identity: 49.6
  • Coverage: 131.0
  • Bit_score: 140
  • Evalue 2.20e-31

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Taxonomy

Smithella sp. F21 → Smithella → Syntrophobacterales → Deltaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 396
ATGATCGTCCTGGACACGCATGCCTGGATATGGTGGATAAGCGATCCGTCACTGCTTTCTGAATCGGCAAAATCCGTCATTGATGCGGAAGTGGCCGAAAGGAAGATATTTATTTCCTCGATCAGCGCGTGGGAAATCGCAATTCTTGTATCGCGCGGCAGGCTGAAAATGACGATGAGCGCGAATGATTGGGTTGCCGCATCGGAGGCGCTGCCGTTTTTCAATTTTGTGCCTGTAACCAACAGTATCGCTCTGAAATCAGTCAACTTACCGGGAACTTTGCATAATGATCCGGCGGATCGCATCATCATTTCCACAGCGTTATCGCTCGGTGCGGTTCTGGTCACAAAAGACGAAAAAATACAAAATTATCCTCACATAACAACGGTCTGGTAA
PROTEIN sequence
Length: 132
MIVLDTHAWIWWISDPSLLSESAKSVIDAEVAERKIFISSISAWEIAILVSRGRLKMTMSANDWVAASEALPFFNFVPVTNSIALKSVNLPGTLHNDPADRIIISTALSLGAVLVTKDEKIQNYPHITTVW*