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S4JAR1_18_9

Organism: ARMAN1

partial RP 45 / 55 MC: 18 BSCG 17 / 51 ASCG 0 / 38
Location: comp(4986..5528)

Top 3 Functional Annotations

Value Algorithm Source
2'-5' RNA ligase similarity KEGG
DB: KEGG
  • Identity: 28.5
  • Coverage: 179.0
  • Bit_score: 75
  • Evalue 2.10e-11
LigT-like (db=superfamily db_id=SSF55144 from=1 to=179 evalue=4.6e-31 interpro_id=IPR009097 interpro_description=RNA ligase/cyclic nucleotide phosphodiesterase GO=Molecular Function: catalytic activity (GO:0003824), Cellular Component: intracellular (GO:0005622), Biological Process: RNA metabolic process (GO:0016070)) iprscan interpro
DB: superfamily
  • Identity: null
  • Coverage: null
  • Bit_score: null
  • Evalue 4.60e-31
no description (db=Gene3D db_id=G3DSA:3.90.1140.10 from=1 to=179 evalue=2.9e-28) iprscan interpro
DB: Gene3D
  • Identity: null
  • Coverage: null
  • Bit_score: null
  • Evalue 2.90e-28

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Taxonomy

Fervidicoccus fontis → Fervidicoccus → Fervidicoccales → Thermoprotei → Crenarchaeota → Archaea

Sequences

DNA sequence
Length: 543
ATGAGGGCTTTCATTGCTTTGTGCATACCAGAACaAATAAGGAAATCTTTATACGCTGAGCTTTCTGGTTTGGCGATAAGGTGCGGAGCCAAGCCGATACCTGAGCAGAATTTGCACATAACGCTTGAGTTTCTCGGCGATATAAGTGAAGACACTGCCAATACAGTTTCTTCtTTAATGAAAAGTTTTGAGGCAAGCAGTTTTGAAGCAAAACTCGGGCCCGTATCCACTTTCGGCAATAAGTCCAGCGTTGCtTTTGTAGGCTTGGAAAAAGGCGCAGAGGATGCAGCATCAATACAGGAAAGGCTGCATTCCGGGCTTCTCAATGTAACTGAATTGCTTGATATCGACAAAAGGGtTTTTGTCCCTCATGTCAGCATAGCTAGGGGCCAATCGAAAAGCCTTAACAAGATGGCTGAGCTCTCATCCAAATGCTGGAAGGGCTCAGAGCTTTTCATTGTAAATAGGATGGAATTCAAGAAAAGCATCCTTGGAAAATCCAGCGCCGCATACGAGACTATTTTTGAGAAGGAGCTTCTATGA
PROTEIN sequence
Length: 181
MRAFIALCIPEQIRKSLYAELSGLAIRCGAKPIPEQNLHITLEFLGDISEDTANTVSSLMKSFEASSFEAKLGPVSTFGNKSSVAFVGLEKGAEDAASIQERLHSGLLNVTELLDIDKRVFVPHVSIARGQSKSLNKMAELSSKCWKGSELFIVNRMEFKKSILGKSSAAYETIFEKELL*