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S4JAR1_36_4

Organism: ARMAN1

partial RP 45 / 55 MC: 18 BSCG 17 / 51 ASCG 0 / 38
Location: 3145..3699

Top 3 Functional Annotations

Value Algorithm Source
30S ribosomal protein S13 similarity KEGG
DB: KEGG
  • Identity: 46.6
  • Coverage: 148.0
  • Bit_score: 149
  • Evalue 1.20e-33
RIBOSOMAL_S13_1 (db=PatternScan db_id=PS00646 from=139 to=152 evalue=0.0 interpro_id=IPR018269 interpro_description=Ribosomal protein S13, conserved site GO=Molecular Function: RNA binding (GO:0003723), Molecular Function: structural constituent of ribosome (GO:0003735), Cellular Component: intracellular (GO:0005622), Cellular Component: ribosome (GO:0005840), Biological Process: translation (GO:0006412)) iprscan interpro
DB: PatternScan
  • Identity: null
  • Coverage: null
  • Bit_score: null
  • Evalue 0.0
Ribosomal protein, S13p/S13a/S18e/organellar S13 types (db=HMMPIR db_id=PIRSF002134 from=24 to=171 evalue=3.9e-51 interpro_id=IPR001892 interpro_description=Ribosomal protein S13 GO=Molecular Function: RNA binding (GO:0003723), Molecular Function: structural constituent of ribosome (GO:0003735), Cellular Component: intracellular (GO:0005622), Cellular Component: ribosome (GO:0005840), Biological Process: translation (GO:0006412)) iprscan interpro
DB: HMMPIR
  • Identity: null
  • Coverage: null
  • Bit_score: null
  • Evalue 3.90e-51

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Taxonomy

mine drainage metagenome

Sequences

DNA sequence
Length: 555
ATGGCTGAAGAAAAAAaTACTCAAAGCAATGAAAAGCAGCACGGAAGAAAAGAGTCTTCCGCTAGGCTGACCTCTGTAATAAGAATTTCGGGAAaGGACGTCAACGGCAGCTTAAGCGTTGAAAGGGCCATAGACTCTGTCAAAGGCATAGGCAGGGACATGGCAAGAGCCATGAGCTACGCCCTGGAAAACAAGCTTGAAATAGACCCCAAGGACGAGATAGGCTCGCTCAGCGAGGAGAACATAGCAAAGCTTGAAGCGCTCATAAAGGACCCGCAAAAGTACGGGATACCAAGATTTATGCTTAACAGAAACAAGGATTTCGAAACAGGAAAAGACGTGCACGTAGTAGGCAACGACCTGATCTTCGCCAACAGGCAGGACGTCTCAAGGGACGTTACGCTTAGGACGTGGAGGGGCGCAAGGCACCAGTACGGACAGAAGGTGCGCGGACAGCACACAAGGTCAACCGGAAGGACCGGAGCCACTATGGGAGTCACGAAGAAGCAGGCGGTAAAGCCCGGAGCGCCTGCGGCGAAATCCGACAAGAAATGA
PROTEIN sequence
Length: 185
MAEEKNTQSNEKQHGRKESSARLTSVIRISGKDVNGSLSVERAIDSVKGIGRDMARAMSYALENKLEIDPKDEIGSLSEENIAKLEALIKDPQKYGIPRFMLNRNKDFETGKDVHVVGNDLIFANRQDVSRDVTLRTWRGARHQYGQKVRGQHTRSTGRTGATMGVTKKQAVKPGAPAAKSDKK*