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AMDSBA1_2_11

Organism: S._benefaciens_IM1

near complete RP 52 / 55 MC: 14 BSCG 51 / 51 ASCG 0 / 38
Location: comp(9740..10711)

Top 3 Functional Annotations

Value Algorithm Source
UDP-glucose 4-epimerase similarity KEGG
DB: KEGG
  • Identity: 42.0
  • Coverage: 333.0
  • Bit_score: 262
  • Evalue 1.60e-67
COG0451: Nucleoside-diphosphate-sugar epimerases n=1 Tax=Magnetospirillum magnetotacticum MS-1 RepID=UPI0000384B58 (db=UNIREF evalue=8.3e-25 bit_score=120.2 identity=31.0 coverage=88.27160493827161) similarity UNIREF
DB: UNIREF
  • Identity: 31.0
  • Coverage: 88.27
  • Bit_score: 120
  • Evalue 8.30e-25
UDP-GLUCOSE 4-EPIMERASE (db=HMMPanther db_id=PTHR10366:SF39 from=9 to=322 evalue=1.0e-86 interpro_id=IPR005886 interpro_description=UDP-glucose 4-epimerase GO=Molecular Function: UDP-glucose 4-epimerase activity (GO:0003978), Biological Process: galactose metabolic process (GO:0006012)) iprscan interpro
DB: HMMPanther
  • Identity: null
  • Coverage: null
  • Bit_score: null
  • Evalue 1.00e-86

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Taxonomy

Pyrinomonas methylaliphatogenes → Pyrinomonas → Acidobacteria → Bacteria

Sequences

DNA sequence
Length: 972
ATGTCTAAATCTGATGCCGTTGTTATTACGGGTGGGCTTGGGTATGTGGGACAGTCGCTAGCAGCTGTGTTAAAGAAACGCGGGGAAATTCCCGTCGTGCTAGATTATCGGAATATTCCCAGCCAGGTTCTTGATGTTCCGGTTTTTCATGGCTCGATAGCCGATGAACAGATTTGGGAGAACATTTTCGAGACGTATCACGTTGACGTGATTTATCATTGTGCCGGGTTGATCGTAGTGTCTGAATCCGTTCGGGAACCGGCGACATATTTTCAGGAAAATCTCGTGGCCCCGTTGGTTATGCTCAATTACATTCGAAAAAAGGGATCTATTCCAGTAATCTTTTCGTCGTCTGCGGCTGTCTATGGCACTCCGGAGGTTGTTCCGATACCGGAGGAGACAGTGAAAGCACCAATCAGTCCGTATGGAATCACTAAATGGCAATTTGAGGAAATACTGCGGTGTTATGATAAAGCTTATGTCCAACCATGGGTGGCTCTCCGCTACTTTAACGTAGCCGGGAGCGTGGAAGGGGTCATGGAATCCCACATCCCGGAAACTCATTTGTTGCCGCGGATTGCGATGGCATTGACGCAGCACGAACAACCCGAGATCTATGGGACCGATTACCCCACGCCAGACGGAACCGCTGTTCGGGATTATATTCATATGCATGATTTGGTAGAGGCTCATTTGCTGGCAGCCCATTACCTACAAGAGGGCGGCGTGTCGGCAGCCTTTAATGTGGGCTCTGGTCACGGGCATTCGGTTCAAGAGGTCATGAATGGGTTTGCTCGGGTTACCGGTCTCCCGGTTAATCCTGCCAGGTTGCCACGAAGAGCGGGAGACCCACCGGTTTTAGTCGCGGATATCCATAAAGCCCAAACGGAACTACGGTTCAAGCCACGCTATTCGCACGATATCGACCGTATGATTCAAGATACGTGGGAACTTCTCACCGCTCGGGAATAG
PROTEIN sequence
Length: 324
MSKSDAVVITGGLGYVGQSLAAVLKKRGEIPVVLDYRNIPSQVLDVPVFHGSIADEQIWENIFETYHVDVIYHCAGLIVVSESVREPATYFQENLVAPLVMLNYIRKKGSIPVIFSSSAAVYGTPEVVPIPEETVKAPISPYGITKWQFEEILRCYDKAYVQPWVALRYFNVAGSVEGVMESHIPETHLLPRIAMALTQHEQPEIYGTDYPTPDGTAVRDYIHMHDLVEAHLLAAHYLQEGGVSAAFNVGSGHGHSVQEVMNGFARVTGLPVNPARLPRRAGDPPVLVADIHKAQTELRFKPRYSHDIDRMIQDTWELLTARE*