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AMDSBA1_2_17

Organism: S._benefaciens_IM1

near complete RP 52 / 55 MC: 14 BSCG 51 / 51 ASCG 0 / 38
Location: comp(17472..18116)

Top 3 Functional Annotations

Value Algorithm Source
peptide deformylase (EC:3.5.1.88) similarity KEGG
DB: KEGG
  • Identity: 63.8
  • Coverage: 199.0
  • Bit_score: 262
  • Evalue 8.30e-68
Peptide deformylase n=1 Tax=Planctomyces limnophilus DSM 3776 RepID=D5SNU3_PLAL2 (db=UNIREF evalue=2.5e-14 bit_score=84.7 identity=28.0 coverage=70.69767441860465) similarity UNIREF
DB: UNIREF
  • Identity: 28.0
  • Coverage: 70.7
  • Bit_score: 84
  • Evalue 2.50e-14
Peptide deformylase (db=superfamily db_id=SSF56420 from=19 to=182 evalue=1.8e-45 interpro_id=IPR023635 interpro_description=Peptide deformylase) iprscan interpro
DB: superfamily
  • Identity: null
  • Coverage: null
  • Bit_score: null
  • Evalue 1.40e-45

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Taxonomy

Sulfobacillus acidophilus → Sulfobacillus → Clostridiales → Clostridia → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 645
ATGGGAGTAAGAATAGCAAGCACCGTTGCAGATGAGGGGAGTCTATTGAAACAGGCTATTTGGTCAATTTCTACACAAAACGATTTCTTGCGGACTCGAACGACACGGATTAAAACCTTTTCAACCGACATCCAACGGCTTTTCACGGACCTTTTCGATACCTGGCCGACTGTGGCTGCGTATGGAATCGCTGCGCCGCAAATCGGGTCTCCCAAGCGGCTGTTTATTTGGAAAGGAACCAAAATGGAGACGCCTGAAATTATCGTTAATCCGAAAATCATTAGGGCACGAGGCGAAGTCAAAGATTATGATGGATGTTTGAGCGTGCCCGGAATATATGGTCCGACACGCCGGGCGGAGTACATTGAACTGTCCGGTACCGATACACAGGGGCGTCCCTGGCGCCGGGGCTTTGAAGGGTTTGATGCACGTATTATTCAGCATGAAGTGGATCATTTGGAAGGGGTACTTTTTATCGACCGCATCGATACACTGGATGAGCTCTATACTATGGAGGAAATCTCCAAAGACACCGAGGATGAGGATGAGGATCCGGAATACCAGAAAACACCCTTAACGGAGGATCTGCGGCGGTTCATTGAAATGCGCCGCCGACCCTTGCCGGGTTACGCTCTCATCTGGTAG
PROTEIN sequence
Length: 215
MGVRIASTVADEGSLLKQAIWSISTQNDFLRTRTTRIKTFSTDIQRLFTDLFDTWPTVAAYGIAAPQIGSPKRLFIWKGTKMETPEIIVNPKIIRARGEVKDYDGCLSVPGIYGPTRRAEYIELSGTDTQGRPWRRGFEGFDARIIQHEVDHLEGVLFIDRIDTLDELYTMEEISKDTEDEDEDPEYQKTPLTEDLRRFIEMRRRPLPGYALIW*