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AMDSBA1_2_23

Organism: S._benefaciens_IM1

near complete RP 52 / 55 MC: 14 BSCG 51 / 51 ASCG 0 / 38
Location: comp(20859..21248)

Top 3 Functional Annotations

Value Algorithm Source
"Winged helix" DNA-binding domain (db=superfamily db_id=SSF46785 from=8 to=114 evalue=5.0e-22) iprscan interpro
DB: superfamily
  • Identity: null
  • Coverage: null
  • Bit_score: null
  • Evalue 5.00e-22
(db=HMMPfam db_id=PF03551 from=22 to=102 evalue=9.7e-20 interpro_id=IPR005149 interpro_description=Transcription regulator PadR N-terminal) iprscan interpro
DB: HMMPfam
  • Identity: null
  • Coverage: null
  • Bit_score: null
  • Evalue 9.70e-20
no description (db=Gene3D db_id=G3DSA:1.10.10.10 from=22 to=110 evalue=1.9e-17 interpro_id=IPR011991 interpro_description=Winged helix-turn-helix transcription repressor DNA-binding) iprscan interpro
DB: Gene3D
  • Identity: null
  • Coverage: null
  • Bit_score: null
  • Evalue 1.90e-17

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Taxonomy

Sulfobacillus acidophilus → Sulfobacillus → Clostridiales → Clostridia → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 390
ATGAAAAAAGAGGGGCTTTTGATGCCAAACCCAATAGAACCGACACGACGGTATCAAACCGGCAAACATTTAGAAGCATTTATTTTATTATTCATATATCAGCAGCCCATGCATGGGGGAGCAATTCTTAAAAGACTGCAAGACGAGCTTCCTCCGGTTTGGAGCATCGACAGTGGTGGAGTTTACAGATTATTGCGTGATTTAGAGAGCCAGGGAGCCCTAACGTCTTCATGGGTAACGGAAGAGCAAGGGGCCCCCAAACGTTATTATCATATTACCCAGAAGGGGATTGAGTGTTTAAAAGAACGTGCCGACGAAATTCGTGTGCGGCGTCAGTCTCTTGACTTGTTCCTGTCGTGGTGGGAACAGAATAATGCGACGGACGATTGA
PROTEIN sequence
Length: 130
MKKEGLLMPNPIEPTRRYQTGKHLEAFILLFIYQQPMHGGAILKRLQDELPPVWSIDSGGVYRLLRDLESQGALTSSWVTEEQGAPKRYYHITQKGIECLKERADEIRVRRQSLDLFLSWWEQNNATDD*