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AMDSBA1_10_25

Organism: S._benefaciens_IM1

near complete RP 52 / 55 MC: 14 BSCG 51 / 51 ASCG 0 / 38
Location: 29094..29861

Top 3 Functional Annotations

Value Algorithm Source
rsmE; hypothetical protein similarity KEGG
DB: KEGG
  • Identity: 40.6
  • Coverage: 234.0
  • Bit_score: 161
  • Evalue 4.10e-37
Ribosomal RNA small subunit methyltransferase E n=5 Tax=Synechocystis sp. PCC 6803 RepID=RSME_SYNY3 (db=UNIREF evalue=6.3e-20 bit_score=103.6 identity=34.2 coverage=88.671875) similarity UNIREF
DB: UNIREF
  • Identity: 34.2
  • Coverage: 88.67
  • Bit_score: 103
  • Evalue 6.30e-20
(db=HMMPfam db_id=PF04452 from=17 to=229 evalue=8.9e-44 interpro_id=IPR006700 interpro_description=Ribosomal RNA small subunit methyltransferase E GO=Biological Process: rRNA processing (GO:0006364), Molecular Function: methyltransferase activity (GO:0008168)) iprscan interpro
DB: HMMPfam
  • Identity: null
  • Coverage: null
  • Bit_score: null
  • Evalue 8.97e-44

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Taxonomy

Sulfobacillus acidophilus → Sulfobacillus → Clostridiales → Clostridia → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 768
ATGATCCGGATTGTTGTGGAAGATCACCAATTTCGCGGTAATCGCCTGACTTTGACACCCGAGCAGGAACACTACCTGTTTCGGGTGATGCGTGCCGGACCAGGGACATCCTTCGAGGCTATTGTCAGCGGAACAAAACTTTTCCGCTGCGTGACGGCAGAGATTGGGGGCCTCGTGCAATGTGTGGGCACTCGTGAGGTATCACAAAGAGTACCTTTATATCTCGCTCAGGCGTTGCTTAAAAAGGATTTGTTCAGTGAAATCGTCGAGAAAGGAACGGAAGCCGGAATTTCTCGATTTTACCCCGTGCTGACGGAGCGAACTATTGTACGGGAGATTTCTGATACAAAGTGGAAACGCTGGCACTCGATCGCGAAAGAGGCAACGGAACAGTCGCAAGGGGACCGTGTGCCAAACATTTTTCCGGCCACATCCTTGCGAGACTTACTAACCGTAGAAGCCACCACCAAAGTGATGTTGGATGCGCAGGGGAAAAATATCTGGGACTGGGTTAGGAAACAGTCTAAAGCGGAATTTTCCGAATGCTTGTTGGCCGTTGGGCCAGAAGGCGGATTTACGGAATCCGAACGTGAATTTTTGACAAGTCATGGATTTGAAGTGGTGTCGCTTGGACCTTATGTATATCGTGCCGAGAACGCGGGAGTTTTCGCGGCGGTCGTTCTGACGGCGTGGCAGGCTTCGGCGGAAACGACGGGGGAGATTTATGAGATGTCCCCTGGGGTTGCGCGAGATGGTGACGATTTCTAG
PROTEIN sequence
Length: 256
MIRIVVEDHQFRGNRLTLTPEQEHYLFRVMRAGPGTSFEAIVSGTKLFRCVTAEIGGLVQCVGTREVSQRVPLYLAQALLKKDLFSEIVEKGTEAGISRFYPVLTERTIVREISDTKWKRWHSIAKEATEQSQGDRVPNIFPATSLRDLLTVEATTKVMLDAQGKNIWDWVRKQSKAEFSECLLAVGPEGGFTESEREFLTSHGFEVVSLGPYVYRAENAGVFAAVVLTAWQASAETTGEIYEMSPGVARDGDDF*