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AMDSBA1_13_11

Organism: S._benefaciens_IM1

near complete RP 52 / 55 MC: 14 BSCG 51 / 51 ASCG 0 / 38
Location: 8615..9055

Top 3 Functional Annotations

Value Algorithm Source
"Winged helix" DNA-binding domain (db=superfamily db_id=SSF46785 from=3 to=140 evalue=2.5e-28) iprscan interpro
DB: superfamily
  • Identity: null
  • Coverage: null
  • Bit_score: null
  • Evalue 2.50e-28
no description (db=HMMSmart db_id=SM00347 from=26 to=127 evalue=2.2e-22 interpro_id=IPR000835 interpro_description=Transcription regulator HTH, MarR-type GO=Molecular Function: sequence-specific DNA binding transcription factor activity (GO:0003700), Cellular Component: intracellular (GO:0005622), Biological Process: regulation of transcription, DNA-dependent (GO:0006355)) iprscan interpro
DB: HMMSmart
  • Identity: null
  • Coverage: null
  • Bit_score: null
  • Evalue 2.20e-22
(db=HMMPfam db_id=PF01047 from=33 to=91 evalue=2.3e-17 interpro_id=IPR000835 interpro_description=Transcription regulator HTH, MarR-type GO=Molecular Function: sequence-specific DNA binding transcription factor activity (GO:0003700), Cellular Component: intracellular (GO:0005622), Biological Process: regulation of transcription, DNA-dependent (GO:0006355)) iprscan interpro
DB: HMMPfam
  • Identity: null
  • Coverage: null
  • Bit_score: null
  • Evalue 2.30e-17

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Taxonomy

Sulfobacillus acidophilus → Sulfobacillus → Clostridiales → Clostridia → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 441
GTGGACCAGGAAAAGGCTGAAGCATTATTTGATGCCGCATTTCGCGTTTTACGCATGATGGCGCGTCAATTCGCGCAAGACCGTGGTCCGGCGCACATTACGCCAACGCAGTATCACATCTTATACCTGATACGGGATCGTCAAACCCTAACCCTGATGGATATGGCCAAACATTTGCAGGTTTCTGCGCCGACAGCCACGCGGGCGGTTGACGCCTTAGTGCAAAAACAAATGTTAAGTAAGGAACGAGATCCTCAGGACCGGAGATTGGTTTGGCTCAGACTGTCGGAGGAAGGGATCCGGCTACTGGCCCGGCAACGCGCGGAACGGGTGAAATTTTTGGCTCGGGAGGCTGATGCCAGGCTGACGGAACAAGAGCAGGATCAGCTCATATTTGTGTTGAATAAACTCATACCCCCGGCATCTTTCGAAGAACAATAA
PROTEIN sequence
Length: 147
VDQEKAEALFDAAFRVLRMMARQFAQDRGPAHITPTQYHILYLIRDRQTLTLMDMAKHLQVSAPTATRAVDALVQKQMLSKERDPQDRRLVWLRLSEEGIRLLARQRAERVKFLAREADARLTEQEQDQLIFVLNKLIPPASFEEQ*