ggKbase home page

AMDSBA1_17_6

Organism: S._benefaciens_IM1

near complete RP 52 / 55 MC: 14 BSCG 51 / 51 ASCG 0 / 38
Location: comp(5986..6867)

Top 3 Functional Annotations

Value Algorithm Source
putative membrane protein similarity KEGG
DB: KEGG
  • Identity: 35.5
  • Coverage: 265.0
  • Bit_score: 174
  • Evalue 5.30e-41
UPF0761 membrane protein Cpha266_1653 n=1 Tax=Chlorobium phaeobacteroides DSM 266 RepID=Y1653_CHLPD (db=UNIREF evalue=2.6e-09 bit_score=68.6 identity=25.2 coverage=81.29251700680273) similarity UNIREF
DB: UNIREF
  • Identity: 25.2
  • Coverage: 81.29
  • Bit_score: 68
  • Evalue 2.60e-09
transmembrane_regions (db=TMHMM db_id=tmhmm from=130 to=152) iprscan interpro
DB: TMHMM
  • Identity: null
  • Coverage: null
  • Bit_score: null

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Pseudomonas deceptionensis → Pseudomonas → Pseudomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 882
ATGAAAAATGTTTTTACCTACTCCAAACAGTTGCTTACACGTCTTGGCCGCGATGATATGACGTCCTACGCGGCAGCTTTGGCTTATAAATTCTTGTTTGCCCTCTTCCCACTGGCTCTCTTTCTCACGGCATTATTGGCGTTTATGCATTTGCCCAGAACCGTCCAGAGCATCGTCGGCCCCTTATCCAACCTGATGCCCCAAGCGGTGGTAAATTTACTCCAGAACAATATTGCCGAGGCCGTGACTCACGAAAATCCGACCATTTTATCTTTGGGCATCCTCGGCTTTATCTGGGGCATGACGGGAGCCTTTATGGAGTTGATGGATGCCTTTAATCACGCCTATGAGCTCCCCTATCCGTTCCGGAGAACCGCATTGCAGCGCTACGCTTTGGGCATCGGCACCGGCATCATCTTCGGTATATTGTTTGTGGTCATGTTGCTGGTGGCAGCGGGAGGCACGTTATTTACACACTGGCTTTTAGGCCATATACTGCATTTGCCCATTGACCAAGCCGCCTCCTTCGTGTTGCATTGGGTGCTCTTGCTCGCACTCATGGTGATAAGCCTAGACGTTCTGTATTCGATTCTACCCGATACGAAACTGTCATTTAGGCTGCTCAGCCCCGGAACCGTTCTGGCCACCATCGTTTTCCTTGTCTTGTCCTTGGGATTTTCCCTCTACACCAGCCATTTTCATTCCTATAACAAAATGTACGGAAGTTTGGGTGCCGTCATTCTGTTGCTCCTGTATTTATATCTGTTTTCACTGGCCATACTTCTGGGGGTAGAAGTCAATGCCCTGTCTCATCACAATGCACAAGACCCACCGCACAGCAGGAAAGTTCTCAGAGAAAATGAATCAGGAAGGCCAAAATGA
PROTEIN sequence
Length: 294
MKNVFTYSKQLLTRLGRDDMTSYAAALAYKFLFALFPLALFLTALLAFMHLPRTVQSIVGPLSNLMPQAVVNLLQNNIAEAVTHENPTILSLGILGFIWGMTGAFMELMDAFNHAYELPYPFRRTALQRYALGIGTGIIFGILFVVMLLVAAGGTLFTHWLLGHILHLPIDQAASFVLHWVLLLALMVISLDVLYSILPDTKLSFRLLSPGTVLATIVFLVLSLGFSLYTSHFHSYNKMYGSLGAVILLLLYLYLFSLAILLGVEVNALSHHNAQDPPHSRKVLRENESGRPK*