ggKbase home page

AMDSBA1_21_1

Organism: S._benefaciens_IM1

near complete RP 52 / 55 MC: 14 BSCG 51 / 51 ASCG 0 / 38
Location: comp(471..1886)

Top 3 Functional Annotations

Value Algorithm Source
transmembrane_regions (db=TMHMM db_id=tmhmm from=21 to=40) iprscan interpro
DB: TMHMM
  • Identity: null
  • Coverage: null
  • Bit_score: null
transmembrane_regions (db=TMHMM db_id=tmhmm from=50 to=67) iprscan interpro
DB: TMHMM
  • Identity: null
  • Coverage: null
  • Bit_score: null
transmembrane_regions (db=TMHMM db_id=tmhmm from=153 to=175) iprscan interpro
DB: TMHMM
  • Identity: null
  • Coverage: null
  • Bit_score: null

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

BJP_IG2102_Clostridiales_34_350 → Clostridiales → Clostridia → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 1416
GTGAGATCCATAATCAGACAAATGGCAGGATATTGGCAACCGGTCTGGGATCATCGGCGGTTTGTGGCATATTCGTGGGCCCTCATGGCATGGCTGGTGTCTACTCTCGCGGCGTTCACCAAAATGTCTCATCCTCAATTTCTGGACAGTCTTCCCCTGGCCGTTACGGCTTTGGCGCTTTTAATCTATCGTTACCTGCCGAGCCAAAGGATGCGGTTTCGCCTGCCTTCCAGGTGGTACTTTATTCTCTGGACACTCTTTGTTGTGAGTGGGGTCGGGGCAGAAAACCATCTCTGGTGGCAGTCTCTTTTAGCCGTTCTTTCCATCCCCATATTGAGCCACTGGCTTGACGAACTGTTACAGCACTCTCAGGGTCAAACGGCATTGTTAGCGGCCATTTGGGCCTTCTCGTGCCTTTTCGAGCGTGCCACGGATCTGACCCCGGCCGTGTTATGGGGATTCATTTTCCTTCCCATGCTAGCGGCCGTTGTCCTGACTCTTTTGAGCATATTTTGGCCCTCATGGTCGAAGCCACAAACATATAGCCATAGTAAAAGAGAAGACGCGTTGACGTCGGTCCAGATGATTCCCTTTGCCGTGGCGGGGATTATTCTCGTTGTGACGCAAATCTTCTTAGCCATTCTGGCCCATTTTCCGTTTGCAGGCCCGCCCCAGCACTACGAGCTGGGATCTTGGACCGTCATCGCCGTGCTCATTATGCTTCCCCTCGCATCGGATTCCGCGGAAGCCCTGATGCTTTATTTGAGTATCACCCTCTCGGGAGTGGCCATTATGCTTCTGGAAGCCCGTTCGGCGGTTTGGCTCGGTTTTCCCTTCTTTCATCTGGCCCGGGACTTTATCATCTTTTGGTGGACGGCGGCCCTCATTCGACTCCGTCAGCCCCATCGCCCTTTTATTCCTATCGTAGTCACCGCCTCAATTTTTTTGGCCGTTATCGGCCGGGAAATCGGTGTCTGGTGGCTGAATTCTTTTCAAAAATTCCCGGTTGAAGAATGGTCGGGAATTGTGCTCTTTTTAATCGTTCCCTCAACCATTCATTACGTATTTGGCAAAGGGAGCCATGAAGCAACGCACCGTAACGCAGCCGGTTCTTATATTCCCGATACGGCCAAGGCGTCCGGGATCGACTTCACTCCGGAGCCAATAGAAGACGTGGAAGCCTGGGCTAAATCGGTATCCCTCCATCTCACCCCCCAAGAGCTTCGTATTTGCGAAGCCCTGCTCTTGGGAATGAGTCATGCCCAAATTGCGGCAGCACTCTACATCTCTCCGAATACGCTGAAAACCCATTTACACAACATTTACCATAAAACCGGCGTCAAAAACCGCTTTGAGTTGGTGACCTTGATCGGCCAAGGGAAAATATCCGCTTCCTCTCCCCTCTCTCGGACATAA
PROTEIN sequence
Length: 472
VRSIIRQMAGYWQPVWDHRRFVAYSWALMAWLVSTLAAFTKMSHPQFLDSLPLAVTALALLIYRYLPSQRMRFRLPSRWYFILWTLFVVSGVGAENHLWWQSLLAVLSIPILSHWLDELLQHSQGQTALLAAIWAFSCLFERATDLTPAVLWGFIFLPMLAAVVLTLLSIFWPSWSKPQTYSHSKREDALTSVQMIPFAVAGIILVVTQIFLAILAHFPFAGPPQHYELGSWTVIAVLIMLPLASDSAEALMLYLSITLSGVAIMLLEARSAVWLGFPFFHLARDFIIFWWTAALIRLRQPHRPFIPIVVTASIFLAVIGREIGVWWLNSFQKFPVEEWSGIVLFLIVPSTIHYVFGKGSHEATHRNAAGSYIPDTAKASGIDFTPEPIEDVEAWAKSVSLHLTPQELRICEALLLGMSHAQIAAALYISPNTLKTHLHNIYHKTGVKNRFELVTLIGQGKISASSPLSRT*