ggKbase home page

AMDSBA1_21_8

Organism: S._benefaciens_IM1

near complete RP 52 / 55 MC: 14 BSCG 51 / 51 ASCG 0 / 38
Location: 6280..7326

Top 3 Functional Annotations

Value Algorithm Source
ABC transporter similarity KEGG
DB: KEGG
  • Identity: 37.2
  • Coverage: 363.0
  • Bit_score: 230
  • Evalue 9.70e-58
Putative daunorubicin resistance ABC transporter, permease protein n=1 Tax=uncultured archaeon RepID=D1JCD2_9ARCH (db=UNIREF evalue=6.8e-17 bit_score=94.0 identity=29.3 coverage=51.862464183381086) similarity UNIREF
DB: UNIREF
  • Identity: 29.3
  • Coverage: 51.86
  • Bit_score: 94
  • Evalue 6.80e-17
transmembrane_regions (db=TMHMM db_id=tmhmm from=323 to=341) iprscan interpro
DB: TMHMM
  • Identity: null
  • Coverage: null
  • Bit_score: null

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Rubrobacter xylanophilus → Rubrobacter → Rubrobacterales → Rubrobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 1047
GTGAACGCCTACCTGACATTGGTGCAAATGAATCTTAAAATGCTCTTTAGAGCCAGAGACGTCCTGTTTTGGAATTTCGCCTTCCCGGTGCTGTTCATGGTCTTAATCGGTACGGCGTTTGGCGCTAGCCCCGGGTTTTCCGCACATGTGGGAATTGAGGGATCGGGTTCCTTTGCGTCCGCTCTCATTCAGGCATTGCGTCATATCAAGGGGATGAGTGTCAGTGTGATCTCCTCCGGGGGGATCCAGGCATTGCAAGCCGGGCATATCGAGGTTTTGGCGCGCATTGCTGGGCACCAGGCCCACCTCATTCGCACCAACGCGTCCGCATCCCAAAGCGTGTCTTCGATTGTGCAAGGAGCCGTGATGGCGATGAATTTGCAGGCCTTGCATCAGCCGCTGCTCTTTCGCGCTACGGTGCGCCAGATTTCGGTACAGGGAACATCTTATATTGATTTTCTGGCACCGGGCATTCTCGGCATGACTTTAATGAACACGGGGCTATTTTCCGGAACCATGTTAATAACCCACCGCAGCCAAGGTATTTTGCGGCGAATTCGGGGAACCCCGCTGCCGACCGGAATCTTCATCGGGGCCCGCATTACCACGCAAATGGTTGTGGCTCTCATTCAGGCCACCCTGATTCTGGTGATTGCGCGGGAAGTGTATCATTTTACTCCGGTGGGGAACCTGTGGTCTTTAATTCCGCTTTTGGTTCTGGGTGAACTGGCTTTTATGACCATCGGTTTTTTCATTGCCGGTGTTGCCAATACCATGGAAGTGGCTTCAGCATTGACGAACATTGTCAGTTTACCCATGATGTTTCTGGCCGGGGTCTTTTACCCCATCAGTCAGCTTCCGCGCTTTATCAAGCCGTTGGCCGACATATTGCCGCTACGGTATTTAACCTCGGGCCTGCGGGCAGTTGTCGTGCACGGCACGCCTTTGACCCATCTAACCAACGATTTCATCGCTTTGGCCTTGGTGGCCGTGGTGTGCGGAGCTTTGGCGGTTAAATTTTTCCGGTGGGAAATGCCTCGTGTTTAG
PROTEIN sequence
Length: 349
VNAYLTLVQMNLKMLFRARDVLFWNFAFPVLFMVLIGTAFGASPGFSAHVGIEGSGSFASALIQALRHIKGMSVSVISSGGIQALQAGHIEVLARIAGHQAHLIRTNASASQSVSSIVQGAVMAMNLQALHQPLLFRATVRQISVQGTSYIDFLAPGILGMTLMNTGLFSGTMLITHRSQGILRRIRGTPLPTGIFIGARITTQMVVALIQATLILVIAREVYHFTPVGNLWSLIPLLVLGELAFMTIGFFIAGVANTMEVASALTNIVSLPMMFLAGVFYPISQLPRFIKPLADILPLRYLTSGLRAVVVHGTPLTHLTNDFIALALVAVVCGALAVKFFRWEMPRV*