ggKbase home page

AMDSBA1_25_5

Organism: S._benefaciens_IM1

near complete RP 52 / 55 MC: 14 BSCG 51 / 51 ASCG 0 / 38
Location: comp(2333..3193)

Top 3 Functional Annotations

Value Algorithm Source
sugar ABC transporter permease similarity KEGG
DB: KEGG
  • Identity: 39.0
  • Coverage: 277.0
  • Bit_score: 220
  • Evalue 4.80e-55
Inner membrane component of binding-protein-dependent transport system n=1 Tax=Ochrobactrum intermedium LMG 3301 RepID=C4WQD4_9RHIZ (db=UNIREF evalue=1.0e-34 bit_score=152.9 identity=33.2 coverage=90.94076655052264) similarity UNIREF
DB: UNIREF
  • Identity: 33.2
  • Coverage: 90.94
  • Bit_score: 152
  • Evalue 1.00e-34
transmembrane_regions (db=TMHMM db_id=tmhmm from=106 to=128) iprscan interpro
DB: TMHMM
  • Identity: null
  • Coverage: null
  • Bit_score: null

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Acidithrix ferrooxidans → Acidithrix → Acidimicrobiales → Acidimicrobiia → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 861
ATGCGGTTAGGACAGCATCAAGACCGGCGGGTGTTGCGCACCGTGCTTCAGGCAGGTGTGGCGCTGATCTTCTTGTTTCCGTTTTACTGGGCAATTGTGCTCAGTGTGGCACCAAAATCCCGGGTTTTCACCTTGCCTCCGGATTTGGTGCCAGGATGGGACTTCCACCCTTGGGAACGGGTATTTCAGGCAGCTCCCTGGGGTTTATATTTTCTACACTCGGTCATCATTACCGGCAGCACCATTCTTTTGGTGCTGATAACCGGGGCGAGCGCCGGCTATGCGTTAAGTTTGCCCACTTTTCGGGGCCGGGAAATAATTTTCGGGATATTTCTCGCGGCCTTAATGGTGCCTCCCGAGGCCATTCTCATTCCCGACTATGTTGTGGCCTATCATTTGCACATTTTGAACTCGCTGCGTGGCCAGGTGTTGCCGTTTGCGGTCAATGTCTTTGCCATTTTCATTTTTCGGCAGTTCTTTAAAACGCTGCCCAAGGAATTGTGGGACGCGGCGCAACTGGACGGGGCCTCATGGTGGCGCTATCTCTGGAATATGGCCTTGCCCTTGTCCAAACCGGCCGTGGCAACGGTGTCGCTCTTGACATTCTCGTCGCAGTGGAGCCAGTTCCAGTGGCCTTTGATTATCACTCAGGGCCAGGCCGCCCGTCCCATTGAAGTCGCCTTGTCTTATTTCCAAGGGTTTGACGGAACCCACTGGCGTGAACTGGCGGCGGCGTCACTTCTGACGCTTACGCCAATTATTATTGTATTTCTCTTTACTCAACGGTATTTTGTGGTGTCCGTAGCCGGACGGGTGGATGACCGCGAGCCCTCTTCCCCCATGACTCCCGTAAATCGGTAG
PROTEIN sequence
Length: 287
MRLGQHQDRRVLRTVLQAGVALIFLFPFYWAIVLSVAPKSRVFTLPPDLVPGWDFHPWERVFQAAPWGLYFLHSVIITGSTILLVLITGASAGYALSLPTFRGREIIFGIFLAALMVPPEAILIPDYVVAYHLHILNSLRGQVLPFAVNVFAIFIFRQFFKTLPKELWDAAQLDGASWWRYLWNMALPLSKPAVATVSLLTFSSQWSQFQWPLIITQGQAARPIEVALSYFQGFDGTHWRELAAASLLTLTPIIIVFLFTQRYFVVSVAGRVDDREPSSPMTPVNR*