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AMDSBA1_25_32

Organism: S._benefaciens_IM1

near complete RP 52 / 55 MC: 14 BSCG 51 / 51 ASCG 0 / 38
Location: comp(30701..31168)

Top 3 Functional Annotations

Value Algorithm Source
Putative transcriptional regulator n=1 Tax=Microvirga sp. WSM3557 RepID=I4YLK4_9RHIZ (db=UNIREF evalue=2.4e-14 bit_score=84.3 identity=35.1 coverage=90.38461538461539) similarity UNIREF
DB: UNIREF
  • Identity: 35.1
  • Coverage: 90.38
  • Bit_score: 84
  • Evalue 2.40e-14
no description (db=Gene3D db_id=G3DSA:1.10.10.10 from=1 to=85 evalue=1.7e-18 interpro_id=IPR011991 interpro_description=Winged helix-turn-helix transcription repressor DNA-binding) iprscan interpro
DB: Gene3D
  • Identity: null
  • Coverage: null
  • Bit_score: null
  • Evalue 1.70e-18
"Winged helix" DNA-binding domain (db=superfamily db_id=SSF46785 from=7 to=88 evalue=3.6e-12) iprscan interpro
DB: superfamily
  • Identity: null
  • Coverage: null
  • Bit_score: null
  • Evalue 3.60e-12

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Taxonomy

Peptococcaceae bacterium BRH_c4b → Clostridiales → Clostridia → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 468
ATGAATCCCCAACTTGTACAGTTTGTTGAACACTTTGGTCTGGACTTCGAACAATATGGATCTCACCGGACTTTAGGGCGTCTGTTCGCCGCTCTGCTCGTGAGTAATGAACCGCAAGGTCTGCAAGAGTTAGCCGATCAGCTGCATGTCAGCAAAGGGACGTGTTCATTGACCGTGCGACAAGCTCTTCAGGCAGGCCTGGTTGAAAAAGTGACAAAACCCGGCGATAGAAAGGACTATTATGCAGTTCCGGAGAATGTGTGGATCCGGAGTACATTAATTCAGCTTCAAATTCTGACACGGTGGAAGACACTGGCGGAAGAAGGACTGCAGACACTGCCGGAAGACACCCCGAGTTTTCGGCGAATGCAAAGCATGCTCCAGTTTTTTGACTATCTGGAAGAAAAGTTTGCGGATATTGCCAGGGAACTTTCTACCTACGCGGCACGGGAAGGGAAGTCCCTATGA
PROTEIN sequence
Length: 156
MNPQLVQFVEHFGLDFEQYGSHRTLGRLFAALLVSNEPQGLQELADQLHVSKGTCSLTVRQALQAGLVEKVTKPGDRKDYYAVPENVWIRSTLIQLQILTRWKTLAEEGLQTLPEDTPSFRRMQSMLQFFDYLEEKFADIARELSTYAAREGKSL*