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AMDSBA1_25_35

Organism: S._benefaciens_IM1

near complete RP 52 / 55 MC: 14 BSCG 51 / 51 ASCG 0 / 38
Location: comp(33465..34439)

Top 3 Functional Annotations

Value Algorithm Source
Helix-turn-helix type 11 domain-containing protein n=1 Tax=Streptomyces viridochromogenes DSM 40736 RepID=D9XHV5_STRVR (db=UNIREF evalue=9.2e-16 bit_score=90.1 identity=31.6 coverage=57.53846153846154) similarity UNIREF
DB: UNIREF
  • Identity: 31.6
  • Coverage: 57.54
  • Bit_score: 90
  • Evalue 9.20e-16
(db=HMMPfam db_id=PF08279 from=10 to=61 evalue=5.2e-14 interpro_id=IPR013196 interpro_description=Helix-turn-helix, type 11) iprscan interpro
DB: HMMPfam
  • Identity: null
  • Coverage: null
  • Bit_score: null
  • Evalue 5.20e-14
"Winged helix" DNA-binding domain (db=superfamily db_id=SSF46785 from=1 to=63 evalue=1.1e-11) iprscan interpro
DB: superfamily
  • Identity: null
  • Coverage: null
  • Bit_score: null
  • Evalue 1.10e-11

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Taxonomy

Paenibacillus sp. P1XP2 → Paenibacillus → Bacillales → Bacilli → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 975
GTGGCCAAATCCGACAACATGCTCTCGTTGTTGTGGTTATTGTACGCCAGAGAGCGAATGACCGCTGCACAGCTCGCCGAGGAATTGGAAATCAGTATTCGTACTGTTTATCGCTATATCGACTCCTTATGTGCAAGTGGGGTACCCATTATTTCGGACTCGGGACATGACGGAGGTTACCGTCTGGCACCTGGGTTCCGCGGTACGCCATTGTTCTTTGATCCTGGTGAAGTCAGTGCGTTGTTTCATGCGACAAAATTCGCGCAAAATTCCGGATATCCATACACGGACGTTTTGGATCAGGCGCTAAGGAAATTACAACGGACACTGGCCCCGGGTCAAATGGCTCATTTGGAGAAACATGTCATGGGCTTTGAGGTGGTGCCGTATCTGCGCGGGGGATCCGTAGAGCCTTGGCTAGGCATTTTGGAAGAATCCGTAGCACAATCCAGGACGGTCAACATGTTATATCAAAAGCTGAATGCCGAAGAGCCGGAATGGAGACAGGTCGAGCCGTATGGACTGGCCTTCTCTGCGGGGGTATGGTATTTGGCGGCTTTTTGCCGAAGCCGCAGGGCTCTTAGAACGTTTCGCGTTGATCGGATTCAAAATCTGAATCCGACGGACGCTGTCTTTACCCGTCCTGCCGATTTCTCTGTGCAGGACTACTTCTCCGACAAGCAAATGAGAGAGAGAATAGAGCGGGAGCCCCACTCCCCGGTGCGTGTCGAAGGCACGCCTTGGGCGATTGCCAGCCTGTGCGATCATTGGTTTCTCCGGCTATGCGTTCTGGAGCAGGAGAGAACCCGCGTCATTCTCCGCATCCCCACAGTGAGACTCGATGAAGCAGCTCTTTACCTTATTTCTTATGGGGATTCCATTCAAATTATTGAACCGAATCTTCTTCGGCAAAGGATGGCCACCTTGTGTTACGCATGGGGAAAACATTTTGAACAAAATGGAGACGTTGACTGA
PROTEIN sequence
Length: 325
VAKSDNMLSLLWLLYARERMTAAQLAEELEISIRTVYRYIDSLCASGVPIISDSGHDGGYRLAPGFRGTPLFFDPGEVSALFHATKFAQNSGYPYTDVLDQALRKLQRTLAPGQMAHLEKHVMGFEVVPYLRGGSVEPWLGILEESVAQSRTVNMLYQKLNAEEPEWRQVEPYGLAFSAGVWYLAAFCRSRRALRTFRVDRIQNLNPTDAVFTRPADFSVQDYFSDKQMRERIEREPHSPVRVEGTPWAIASLCDHWFLRLCVLEQERTRVILRIPTVRLDEAALYLISYGDSIQIIEPNLLRQRMATLCYAWGKHFEQNGDVD*