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AMDSBA1_43_11

Organism: S._benefaciens_IM1

near complete RP 52 / 55 MC: 14 BSCG 51 / 51 ASCG 0 / 38
Location: comp(11494..12375)

Top 3 Functional Annotations

Value Algorithm Source
binding-protein-dependent transport system inner membrane protein similarity KEGG
DB: KEGG
  • Identity: 38.5
  • Coverage: 278.0
  • Bit_score: 207
  • Evalue 7.40e-51
Binding-protein-dependent transport system inner membrane component n=1 Tax=Paenibacillus sp. oral taxon 786 str. D14 RepID=C6IXK9_9BACL (db=UNIREF evalue=3.8e-29 bit_score=134.4 identity=30.0 coverage=91.83673469387756) similarity UNIREF
DB: UNIREF
  • Identity: 30.0
  • Coverage: 91.84
  • Bit_score: 134
  • Evalue 3.80e-29
transmembrane_regions (db=TMHMM db_id=tmhmm from=154 to=176) iprscan interpro
DB: TMHMM
  • Identity: null
  • Coverage: null
  • Bit_score: null

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Taxonomy

bacterium UASB270 → Bacteria

Sequences

DNA sequence
Length: 882
ATGATAGCAGCCAAAGTTGGTGATGGTGCCTCTCGCATCTCGCGAATCCCGAGACATACGTTGTCTGGAGACCGTGTCTTTTCGTACATCGTCTTAAGCGTATTCACCGTACTGACCTTATTCCCCATTTTTATTATGATAGCTGTATCCTTAATGCCTAGCCGTCATTTATCGTCTGATCTATATCATTTATGGCCCACTAATATTGATTTGCGCAACTATCTCTTGATGTGGTCTCAACTTCCCGTAGCGCATTTGCTTCTGAATAGCGTCATTATTGCTGGGGGAAGTACGATTCTAGCCTTACTTACGGGAATTCCAGCCGCCTTCGCGTTATCGCGCATGAACATAGTCGGCCGGAAAATATGGCTTTTCGGGTTTCTTGCGACTCAGCTATTTTCGCCTTCTATAATCATTGTATCCGCTTATCATGTCATGGCTATTGCTCACCTCACCGACACATACTGGGGCTTAATAATTTTGGATGCCGGATTCTATTCATTACCTTTTGTTTTGTGGAGCATCGCGGGATTTATGCGGCACATTCCCCGCGAATTGGAGGAAACTGTGGATGTAGACGGCGGAAGTACATGGACAAAGATTTGGAGAGTATTTGTGCCGATAGCCATTCCCTCAATTGTTGTTGCCGGAGTGTATGCGTTTATCCAATCATGGAATGATTTTGCCTTTGCCTTAACGTTAGCAACTTCCCAGTCGACCATGCCCTTACCCATCGGCATCTACAGCTTTATGGGCGCATACCAGATACAATGGAACTATCTTATGGGAGCTTCCTTAGTGGCAACCCTTCCTGTTCTGATACTGTTTCTTATTGTTCAAAAGCGCTTAGTATCCGGAATGCTGGCGGGATCGATAAAATGA
PROTEIN sequence
Length: 294
MIAAKVGDGASRISRIPRHTLSGDRVFSYIVLSVFTVLTLFPIFIMIAVSLMPSRHLSSDLYHLWPTNIDLRNYLLMWSQLPVAHLLLNSVIIAGGSTILALLTGIPAAFALSRMNIVGRKIWLFGFLATQLFSPSIIIVSAYHVMAIAHLTDTYWGLIILDAGFYSLPFVLWSIAGFMRHIPRELEETVDVDGGSTWTKIWRVFVPIAIPSIVVAGVYAFIQSWNDFAFALTLATSQSTMPLPIGIYSFMGAYQIQWNYLMGASLVATLPVLILFLIVQKRLVSGMLAGSIK*