ggKbase home page

AMDSBA1_43_20

Organism: S._benefaciens_IM1

near complete RP 52 / 55 MC: 14 BSCG 51 / 51 ASCG 0 / 38
Location: comp(20305..20688)

Top 3 Functional Annotations

Value Algorithm Source
endoribonuclease L-PSP similarity KEGG
DB: KEGG
  • Identity: 58.9
  • Coverage: 124.0
  • Bit_score: 146
  • Evalue 3.90e-33
Endoribonuclease L-PSP n=2 Tax=Burkholderia RepID=B1G1M6_9BURK (db=UNIREF evalue=4.3e-09 bit_score=66.6 identity=32.5 coverage=93.75) similarity UNIREF
DB: UNIREF
  • Identity: 32.5
  • Coverage: 93.75
  • Bit_score: 66
  • Evalue 4.30e-09
seg (db=Seg db_id=seg from=40 to=53) iprscan interpro
DB: Seg
  • Identity: null
  • Coverage: null
  • Bit_score: null

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Streptosporangium roseum → Streptosporangium → Streptosporangiales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 384
ATGTCTTCGTTGAAAGCCATCCAAACTGCAAAGGCTCCAGCTCCCGGAGGAGCCTACTCTCAAGGCATTCAGGCGGGCTCAATTGTTTTCACCGCCGGACTCGGTCCCATCGACCCCGAAACCGGAGGCGTCGTGGGCGAGACCGTCGAAGAACAAACTCGCCAGGTAATGCTTAACCTCAAAGCGATTTTAGAAGAGGCCGGTTTAGGGCTAAACCGAGTAATCAAAACCACAGTTCATTTGCAGAATCTCGAGCAGGACTTTGCGGGGTTTAACGAGATCTACGAGAGCTTTTTCGAGCCGCCCTACCCTGTTCGCACCACGGTTGGTTCCACGTTGAAGGGTATCTTAGTGGAAATCGACATGGTAGCGTTGGCAGAATAG
PROTEIN sequence
Length: 128
MSSLKAIQTAKAPAPGGAYSQGIQAGSIVFTAGLGPIDPETGGVVGETVEEQTRQVMLNLKAILEEAGLGLNRVIKTTVHLQNLEQDFAGFNEIYESFFEPPYPVRTTVGSTLKGILVEIDMVALAE*