ggKbase home page

AMDSBA1_53_36

Organism: S._benefaciens_IM1

near complete RP 52 / 55 MC: 14 BSCG 51 / 51 ASCG 0 / 38
Location: comp(27965..28297)

Top 3 Functional Annotations

Value Algorithm Source
transmembrane_regions (db=TMHMM db_id=tmhmm from=33 to=55) iprscan interpro
DB: TMHMM
  • Identity: null
  • Coverage: null
  • Bit_score: null
transmembrane_regions (db=TMHMM db_id=tmhmm from=75 to=97) iprscan interpro
DB: TMHMM
  • Identity: null
  • Coverage: null
  • Bit_score: null
(db=HMMPfam db_id=PF05656 from=12 to=108 evalue=1.3e-25 interpro_id=IPR008523 interpro_description=Lactobacillus phage LBR48, DUF805 GO=Cellular Component: integral to membrane (GO:0016021)) iprscan interpro
DB: HMMPfam
  • Identity: null
  • Coverage: null
  • Bit_score: null
  • Evalue 1.30e-25

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Prevotella sp. oral taxon 473 → Alloprevotella → Bacteroidales → Bacteroidia → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 333
ATGATGGCTCTGTACTTATCTGGCTGGCAACACTTTGCCGATTTTACCACCCGAGCCAACCGGGCCCAGTACTGGTTGTTCACTCTGGTTAATAGCGCTTTCGGCTGGATTTTGATGGGATTGGGCCACGGTTTTGTCGTTGTGGCCTATTTGTGGCTTTTCGTATTAATCATTCCGAACATCGCGATCCAGGTGCGGCGGCTGCATGATATCAATCGGTCCGGTTGGTGGATTTTGATTGTGCTGGTGCCTATTGTGGGCAGCATTGTGTTGCTGGTGTTCGATTTGCTGCCCGGTGTGTCTCCCAATCGGTACGACGAACCCGCTATTTAA
PROTEIN sequence
Length: 111
MMALYLSGWQHFADFTTRANRAQYWLFTLVNSAFGWILMGLGHGFVVVAYLWLFVLIIPNIAIQVRRLHDINRSGWWILIVLVPIVGSIVLLVFDLLPGVSPNRYDEPAI*