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AMDSBA3_4_54

Organism: S._acidophilus_IM3

near complete RP 45 / 55 MC: 1 BSCG 50 / 51 ASCG 0 / 38
Location: comp(47780..48460)

Top 3 Functional Annotations

Value Algorithm Source
ribosomal RNA small subunit methyltransferase E similarity KEGG
DB: KEGG
  • Identity: 40.6
  • Coverage: 234.0
  • Bit_score: 149
  • Evalue 1.40e-33
Ribosomal RNA small subunit methyltransferase E n=1 Tax=Gloeobacter violaceus PCC 7421 RepID=Q7ND55_GLOVI (db=UNIREF evalue=1.2e-17 bit_score=95.9 identity=31.4 coverage=92.95154185022027) similarity UNIREF
DB: UNIREF
  • Identity: 31.4
  • Coverage: 92.95
  • Bit_score: 95
  • Evalue 1.20e-17
(db=HMMPfam db_id=PF04452 from=21 to=222 evalue=4.1e-41 interpro_id=IPR006700 interpro_description=Ribosomal RNA small subunit methyltransferase E GO=Biological Process: rRNA processing (GO:0006364), Molecular Function: methyltransferase activity (GO:0008168)) iprscan interpro
DB: HMMPfam
  • Identity: null
  • Coverage: null
  • Bit_score: null
  • Evalue 4.10e-41

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Taxonomy

Sulfobacillus acidophilus → Sulfobacillus → Clostridiales → Clostridia → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 681
ATGATTCGCCTAGCCATTGAAGGCCAGGGGAGGTCGTCTCGAATATACCCGCTGGCACCGGCGGATTGGCATTATGTGACCGTGGTGATGCGTCGCGCCATTGGCGACGCCATTGAGGTGATGACCGCAGACGGCCAAGTCTGGCAAGCGCAATTGCTGGACCGGGGCGTGCAGCTTCAAGTGCCGCTAATGCGCCATGGTCTTCCGCGTCGTGAGATCACGCTGTACCAGGCCCTTTTAAAAGGTGACCACTTTAGTGCGGTAATAGACCGTGCCACTCAGGCGGGTGTGATGCACTTTGTACCCGTGTTGACGGAGCGATGCATCGTGCGAGAAGTCACGGCAGCAAAGGCTCGGCGCTGGCGTCTGGTGGCAAAAGAGGCGAGTGAACAAAGTCGGCGAGCGTATATTCCGGATGTAGGCGAGATGCTTTCGCTGGCCGAGCTGCGGTTGCCGCCGCAAAGTGAAGGATTTGTGTTAGATCCCCAGGGAGAATATCGCCGGGTATGGCTCTCACAGAGCGTTCAGCCGCTAAGCTTGGTGATAGGGCCGGAAGGAGGGTGGAGTGCGGGCGAATTGGAGGTGTTGCAAGCCGGAGGCTTTGACCGTATTTCCCTAGGAGAGGGAATTTTTCGCGCGGAAAACGCGGGCGCCTTTGCAGCGATTTTGTTTTTGCAATAG
PROTEIN sequence
Length: 227
MIRLAIEGQGRSSRIYPLAPADWHYVTVVMRRAIGDAIEVMTADGQVWQAQLLDRGVQLQVPLMRHGLPRREITLYQALLKGDHFSAVIDRATQAGVMHFVPVLTERCIVREVTAAKARRWRLVAKEASEQSRRAYIPDVGEMLSLAELRLPPQSEGFVLDPQGEYRRVWLSQSVQPLSLVIGPEGGWSAGELEVLQAGGFDRISLGEGIFRAENAGAFAAILFLQ*