ggKbase home page

AMDSBA3_8_13

Organism: S._acidophilus_IM3

near complete RP 45 / 55 MC: 1 BSCG 50 / 51 ASCG 0 / 38
Location: comp(19245..19928)

Top 3 Functional Annotations

Value Algorithm Source
ABC transporter-like protein similarity KEGG
DB: KEGG
  • Identity: 51.3
  • Coverage: 226.0
  • Bit_score: 240
  • Evalue 3.60e-61
Lipoprotein-releasing system ATP-binding protein LolD n=8 Tax=Treponema RepID=LOLD_TREPA (db=UNIREF evalue=4.8e-27 bit_score=127.1 identity=35.4 coverage=95.17543859649122) similarity UNIREF
DB: UNIREF
  • Identity: 35.4
  • Coverage: 95.18
  • Bit_score: 127
  • Evalue 4.80e-27
ATP BINDING CASSETE (ABC) TRANSPORTER (db=HMMPanther db_id=PTHR19222 from=2 to=220 evalue=9.8e-108) iprscan interpro
  • Identity: null
  • Coverage: null
  • Bit_score: null

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Caldicellulosiruptor bescii → Caldicellulosiruptor → Thermoanaerobacterales → Clostridia → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 684
GTGTTGCTCTTACGGGATATTAGCAAAGTCTATCAAGGGCGCTCGCCGGCGATCGCATTGCAAGGCATCAACTTAACGCTGCCGCAGGGTGAATTTCTGGCTGTGGTCGGAAGTTCCGGGTCTGGCAAGTCGACGTTGCTCAATATCCTGGGGCTGTTGGATCGGCCTACAACGGGTGAGTATTGGATTGACGGAACCAGGGTGCGTGGTTGGTCGGACGCGCGCCTTGCCCGCATGCGCAATGAAACTCTGGGCTTTGTCTATCAATCTTTTAACTTGATTCCCACTTTGTCGGCACGCGAGAACGTCGAGCTTCCGCTGGTATATCGCCAAGTCCCACCGAAGGAGCGTAGGCATCAGGTTGATTTGTGGCTTGAACGCGTGCGGCTTTCTGATCGGATGCATCACTATCCAGCCGAATTGTCGGGTGGTCAGCAGCAGCGGGTGGCGGTCGCCCGGGCATTGGTGCATAACCCCAAGGTCCTGTTTGCGGATGAGCCGACTGCAAATCTTGATGGGGACTCGACGGATGAGATTGTGCGGGTTTTCGATGAAGTGCACGCCAGTGGCCAAACCATTGTGCTAATTACCCACGATCGGTATTTCGCACAGGCTGCCGATCGTGTGGTGAAGCTTGCTCATGGACGGTTGGTGTCGGAAGCGGTGACGCGGCGTGCGAATTGA
PROTEIN sequence
Length: 228
VLLLRDISKVYQGRSPAIALQGINLTLPQGEFLAVVGSSGSGKSTLLNILGLLDRPTTGEYWIDGTRVRGWSDARLARMRNETLGFVYQSFNLIPTLSARENVELPLVYRQVPPKERRHQVDLWLERVRLSDRMHHYPAELSGGQQQRVAVARALVHNPKVLFADEPTANLDGDSTDEIVRVFDEVHASGQTIVLITHDRYFAQAADRVVKLAHGRLVSEAVTRRAN*