ggKbase home page

AMDSBA3_16_24

Organism: S._acidophilus_IM3

near complete RP 45 / 55 MC: 1 BSCG 50 / 51 ASCG 0 / 38
Location: comp(29000..29347)

Top 3 Functional Annotations

Value Algorithm Source
transposase, IS605 OrfB family similarity KEGG
DB: KEGG
  • Identity: 58.5
  • Coverage: 82.0
  • Bit_score: 113
  • Evalue 4.40e-23
Putative uncharacterized protein n=8 Tax=Clostridiales RepID=B0NYL3_9CLOT (db=UNIREF evalue=7.8e-10 bit_score=68.9 identity=39.3 coverage=71.55172413793103) similarity UNIREF
DB: UNIREF
  • Identity: 39.3
  • Coverage: 71.55
  • Bit_score: 68
  • Evalue 7.80e-10
coiled-coil (db=Coil db_id=coil from=46 to=71 evalue=NA) iprscan interpro
DB: Coil
  • Identity: null
  • Coverage: null
  • Bit_score: null

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Thermoanaerobacterium thermosaccharolyticum → Thermoanaerobacterium → Thermoanaerobacterales → Clostridia → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 348
GTGGTCTTTGAACCTGACCTATTGACAGAAGCCGTTGCGCCACTCAGAGAGATTCGAAACGTGGTGGGCATTGATCGGGGATTGCTTTCGCTGATTGCCACCTCGGATGGGGAATTCTTCGAAAATCCCCAGTGGTTACAGAAGAGCGAAAAGCGCCTGAAGCGCAAGCGACGACAGCTTTCCCGCAAAAAGAAAGGCAGCAAGAACCGTGAACAGGCTAAACGTGAACTCGGATCTATTCACGACCATGCGGCAAACCAACGTAAAGACCACCTGCACAAAGTGAGTCGGTCGCTGATTGACCGTTACTGGAATACAAAGCAAAAACGCGGGCAAGCAATTGATTAA
PROTEIN sequence
Length: 116
VVFEPDLLTEAVAPLREIRNVVGIDRGLLSLIATSDGEFFENPQWLQKSEKRLKRKRRQLSRKKKGSKNREQAKRELGSIHDHAANQRKDHLHKVSRSLIDRYWNTKQKRGQAID*