ggKbase home page

AMDSBA3_29_28

Organism: S._acidophilus_IM3

near complete RP 45 / 55 MC: 1 BSCG 50 / 51 ASCG 0 / 38
Location: comp(34663..35502)

Top 3 Functional Annotations

Value Algorithm Source
transport system inner membrane component similarity KEGG
DB: KEGG
  • Identity: 36.0
  • Coverage: 286.0
  • Bit_score: 192
  • Evalue 1.40e-46
ABC-type Maltose/ Maltodextrin permease n=1 Tax=Coprothermobacter proteolyticus DSM 5265 RepID=B5Y6P6_COPPD (db=UNIREF evalue=8.4e-26 bit_score=123.2 identity=31.0 coverage=98.92857142857143) similarity UNIREF
DB: UNIREF
  • Identity: 31.0
  • Coverage: 98.93
  • Bit_score: 123
  • Evalue 8.40e-26
transmembrane_regions (db=TMHMM db_id=tmhmm from=139 to=161) iprscan interpro
DB: TMHMM
  • Identity: null
  • Coverage: null
  • Bit_score: null

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Paenibacillus lactis → Paenibacillus → Bacillales → Bacilli → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 840
ATGAGTATGAACCAAGCGCGTCGGCCCAAATACGTGATCTACTTGCTATTGGTCATGTTGCTGGTTTTAGCGGCCTACCCAATGATTTTTATGGTGGCAAATGCATTAAAAAATGGGGACCAGTATACGGTGAATCCCTTTAGTTTTGGAGTGGCCCCACCTTTTGGGCAGTTCTTTGTTTTGGCATGGGAATATCTCGAAGCCTCATTCTTTAGAACGTTCTTGATTATCGCGTTGAGTCTGGTAGGAGTCATTGGGTTTGGAATGCTCAGCGCATATGCATTTGCGCGGCTAAAATTTTATGGCAAGGCCTTCCTCTTTTATGCAATTTTTGGACTGTTGCTCGTCCCCGGATTTCTGACGCTGATTCCTTTGTTCCTACAAATTAAGAATATGGGGTTATTAGACTCCGATTGGGCTTTAATTTTGCCATACATTGCAGGCGGTCAAGCCTTTGCGATCTTTGTATTCCGAACGTTTGTGCAAGGGATCCCTAATGAATTGTTTGAGTCTGCACGATTGGACGGAGCCAATGACTTTCAAATTTTTCAGCGAATCGTGGTGCCATTGTCGGTGCCTATTATGATTACGATTGGTCTATTAAACATTACAGCGATTTATGGGGATTATGTATGGCCTTCTTTGGTGCTAGCCCCGTCTCAGTCGACGGTTGCCATGGCAATCGCAAATTTTGTTCCGCCACCCGCGATTGTGAGCGTCAATGTTGTGAATATGCAGTTTGCCGCGTACACCTTGGCGGCGGTTCCAATGGTGCTGCTGTTCTTGTTTTTCATGCGGTATTTTGTCGCGGGTCTGACGAGCGGTGCCATCAAGATGTAG
PROTEIN sequence
Length: 280
MSMNQARRPKYVIYLLLVMLLVLAAYPMIFMVANALKNGDQYTVNPFSFGVAPPFGQFFVLAWEYLEASFFRTFLIIALSLVGVIGFGMLSAYAFARLKFYGKAFLFYAIFGLLLVPGFLTLIPLFLQIKNMGLLDSDWALILPYIAGGQAFAIFVFRTFVQGIPNELFESARLDGANDFQIFQRIVVPLSVPIMITIGLLNITAIYGDYVWPSLVLAPSQSTVAMAIANFVPPPAIVSVNVVNMQFAAYTLAAVPMVLLFLFFMRYFVAGLTSGAIKM*