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AMDSBA3_43_23

Organism: S._acidophilus_IM3

near complete RP 45 / 55 MC: 1 BSCG 50 / 51 ASCG 0 / 38
Location: 23238..23600

Top 3 Functional Annotations

Value Algorithm Source
Transcriptional regulator, ArsR family n=1 Tax=uncultured candidate division OP1 bacterium RepID=H5SSB0_9BACT (db=UNIREF evalue=1.0e-07 bit_score=62.0 identity=39.0 coverage=66.94214876033058) similarity UNIREF
DB: UNIREF
  • Identity: 39.0
  • Coverage: 66.94
  • Bit_score: 62
  • Evalue 1.00e-07
"Winged helix" DNA-binding domain (db=superfamily db_id=SSF46785 from=6 to=93 evalue=6.4e-26) iprscan interpro
DB: superfamily
  • Identity: null
  • Coverage: null
  • Bit_score: null
  • Evalue 6.40e-26
no description (db=HMMSmart db_id=SM00418 from=9 to=93 evalue=1.5e-25 interpro_id=IPR001845 interpro_description=HTH ArsR-type DNA-binding domain GO=Molecular Function: sequence-specific DNA binding transcription factor activity (GO:0003700), Cellular Component: intracellular (GO:0005622), Biological Process: regulation of transcription, DNA-dependent (GO:0006355)) iprscan interpro
DB: HMMSmart
  • Identity: null
  • Coverage: null
  • Bit_score: null
  • Evalue 1.50e-25

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Taxonomy

RIFOXYA1_FULL_Alicyclobacillus_53_8_curated → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 363
ATGAATTCCTTTCGAGATTGGGCGGAATTTTACAAAGTACTGGGAGATCCCACGCGTCTGCGACTGTTGGCGTTACTGGCACAAGAACCGCACTGTGTGTGTGAATTGGTAGGCTTTTTGGGTTTGTCACAGCCAACCATATCGCACCACTTGAGTCGGCTGCGCTATGCGGGGTTAATTCGTGAGGAGCGCCGTGGCCAATGGATTTTTTACTCGGTTGTCACGAACCGGGTATCCTTTTGGACCGAGTTGGTGACCGCTTTGCCAGGTGTGGCCAATGAGCCTCAAGCGCGTCCCACTGATACGGCTATTGCCTGTCAGGTGGGCAACATCGCGGTCGAAGACGCGCGTAGCGATCCCTAA
PROTEIN sequence
Length: 121
MNSFRDWAEFYKVLGDPTRLRLLALLAQEPHCVCELVGFLGLSQPTISHHLSRLRYAGLIREERRGQWIFYSVVTNRVSFWTELVTALPGVANEPQARPTDTAIACQVGNIAVEDARSDP*